Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1633 ATGGCTTCTTCCAATGTCATGCCATGGCTTCATTTGACCTTTCTCTTGGTTTTTCACATTTTTCTGATAGCACCATTCTGTAATTGCCAGCCTCAGAATTTAGAGACCTTCTTTCCGGATGAAACTTCATCGCCGGCTCCTGAACCAACCATTTCTCCAGCGCCGCCGGTTGAGCCACCGCCACCGCCGACACGAGAACAGCCGGCATCGGCTCCGGCGGCATCAACCAGCAGTTCTTCATCGAATAGTAAGATAGCGAAGGCCGTGGCTGCTACTGCAGCAAGCACTCTGGTTGTTTCTGGGTTACTTTTCTTTATAATCCGAAGATGTTTGAAGAAAAGACGCAAAGAGGAGACGGGTATAATCTCTGCTTCGACACCAGGGGATAGAAGAGTTGTGCCCCGGACGAACGAGTTCGAGCGAATTGATGGAAATGTGAGGGGATTGATTGTTGATGAGAATGGTTTGGATGTGATTTATTGGAGGAAGCTTGAAGGGAAGAATAACTCCAAGAAGGGTTTGCGGAAGGAGGTTCGACCTATTGCTAAAGATCAAGAACAAGAAGTAGAAGTAGAAGAAGATGGAAATGTAGGAAGTCGTCGAGGGAAAAGATCTGATCCTATTCAAGAAATTCCTCTCCTACGTGGGAAGTCTTCAGCTTCCCATAAGCACGTATTACCAGAAGATGAACATGAGTTAAATCGAAGTACGAGGAGAACGTCGTCTAGAAAAACTAAACCTCCTGCTCCTCCTCCTCCTGCTTCACCACCACTACCACCACCACCCTCCGCTTATTTTTCTGCTGCTCCAAAAGCAAGAAGCCCCGAAGCTCCACCTCCACCTCCTGCTTCTGCTGCTTCACCACCATTACCACCACCACCTTCCGCTTATTTCTCCGCTGTTCCAAAGGCGAAAAGCCCTGAACCACCACCTCCACCTCCTGCTTCTGCTGCTTCACCACCATTACCACCACCACCTTCCGCTTATTTCTCCGCTGTTCCAAAGGCGAAAAGCCCTGAACCACCACCTCCACCTCCTGCTTCTGCTGCTTCACCACCATTACCACCACCACCTTCCGCTTATTTCTCCGCTGTTCCAAAGGCGAAAAGCCCTGAACCACCACCTCCACCTCCTGCTTCTGCTGCTTCACCACCATTACCACCACCACCTTCCGCTTATTTCTCCGCTGTTCCAAAGGCGAAAAGCCCTGAACCACCACCTCCACCTCCTACTCCACCAATCTCGGATAGAAAGAGTCCGGCACCACCCCCTCCTCCTCCTCCTGTATCGGCTAGAAAGACTCCGGCACCGCCTCCTCCACCCATGTCGAGTAGTTTGAGGTCATCTTCAAAACCACCACCTACCCCCATTGAAATGTCAGCTACGGGGAAGCCTTCAGGGGAAAGCGTGTTAGGAGAAGGCAATGATAAGGTGAAACTGAAGCCTTTGCACTGGGATAAGGTGAATGCTAATGCTGATCATTCTATGGTTTGGGACAAGATGGGCCGAGGTTCTTTCAGGGTTGATCAAGATCTTATGGAAGCTCTCTTTGGATTTGTGGCCACAAGCAAAAGAACCACAAAAGGCAAAAACAACTCGACTAGTCCAAGCGGGGACGCCTCTGCATCATCAACCAATACTTTCATTCTTGATTCTAGAAAATCACAAAATGTTGCCATTGTTTTGAAGTCTCTGGCTGTATCACGAGAAGAAATTCTTGATGCCCTTAATGAGGGTCAAGGCCTTAATGCAGATACCATTGAGAAGCTTTCCAGAGTTGCTCCAACAGAAGAAGAGCAATCTGAGATCCTTGACTACAAAGGAGACCCAGCAAGACTTGCAGTTGCAGAATCTTTCCTCTATGATATTCTCAAGGCTGTTCCTTCAGCTTTCAAGCGCTTGAATGCCATGCTTTTCAGGTTGAACTATGACTCAGAGATATTAGAAATCAAGGAATATTTAAACACCCTTGAATTGGGGTGCAAGGAACTTCGAAATAGAGGACTGTTTGTGAAGCTTCTGGAAGCAGTCCTCAAGGCTGGAAACCGTATGAACGCTGGTACTTCAAGAGGTAATGCTCAAGCTTTCAACTTGAGTTCTTTGAGGAAGCTCTCTGATGTCAAAAGCACCAATGGAAAAACCACTTTGCTTCACTTTGTGGTTGAAGAAGTAGTCCGGTCTGAGGGAAAACGTTGTGTTCTTAACCGCGATCGCAGCCTGAATCGTAGTGGCAGTAGGAGAAGAAACAGCAATGGAGACTCTGAGAACTCTGTTTCAGATGAACAACAAGAAAAGGAATATTTAAGGCTAGGACTACCATTTGTTGGAGGAATCAGTGCTGAGTTCTCCAACGTAAAGAAAGCAGCCCTTGTAGATTACAACAATTTAGTTAGTTCAATCTCAGCACTCGTGACCCGGATAACTGAATTTCAAGTACTTGTTTCCCAGTGCAGAAATGGTAAAGGAGGAAACTTTGTGAAGGAAATGGACCAGTTTCTGAGAAATGCTGAGGATGAATTGAGATCAGTCAGAGATGAGCAAACAAGGGTAATGCAGCTCGTGAACAAAACAACAGAATATTATCAAGGAGGAGCCTCAAAAGATACGACAGAAAATCTTGAAATATTTGTCATCGTCAAGGATTTTCTGGGAATGGTTGATCAAGCCTGCATTGAAATTGCTCGTAACATGCAAAAGAGGAAGATAGCCAAAGCAAGTTCTGGTGAAAAATGTCCACTCATGGTTAGTAATACGTTAGAAACAATACCAATCAGCCATATAAAGGATGAGGAAGAAGGAAAATCATGCAATTAA 2814 0.4623 MASSNVMPWLHLTFLLVFHIFLIAPFCNCQPQNLETFFPDETSSPAPEPTISPAPPVEPPPPPTREQPASAPAASTSSSSSNSKIAKAVAATAASTLVVSGLLFFIIRRCLKKRRKEETGIISASTPGDRRVVPRTNEFERIDGNVRGLIVDENGLDVIYWRKLEGKNNSKKGLRKEVRPIAKDQEQEVEVEEDGNVGSRRGKRSDPIQEIPLLRGKSSASHKHVLPEDEHELNRSTRRTSSRKTKPPAPPPPASPPLPPPPSAYFSAAPKARSPEAPPPPPASAASPPLPPPPSAYFSAVPKAKSPEPPPPPPASAASPPLPPPPSAYFSAVPKAKSPEPPPPPPASAASPPLPPPPSAYFSAVPKAKSPEPPPPPPASAASPPLPPPPSAYFSAVPKAKSPEPPPPPPTPPISDRKSPAPPPPPPPVSARKTPAPPPPPMSSSLRSSSKPPPTPIEMSATGKPSGESVLGEGNDKVKLKPLHWDKVNANADHSMVWDKMGRGSFRVDQDLMEALFGFVATSKRTTKGKNNSTSPSGDASASSTNTFILDSRKSQNVAIVLKSLAVSREEILDALNEGQGLNADTIEKLSRVAPTEEEQSEILDYKGDPARLAVAESFLYDILKAVPSAFKRLNAMLFRLNYDSEILEIKEYLNTLELGCKELRNRGLFVKLLEAVLKAGNRMNAGTSRGNAQAFNLSSLRKLSDVKSTNGKTTLLHFVVEEVVRSEGKRCVLNRDRSLNRSGSRRRNSNGDSENSVSDEQQEKEYLRLGLPFVGGISAEFSNVKKAALVDYNNLVSSISALVTRITEFQVLVSQCRNGKGGNFVKEMDQFLRNAEDELRSVRDEQTRVMQLVNKTTEYYQGGASKDTTENLEIFVIVKDFLGMVDQACIEIARNMQKRKIAKASSGEKCPLMVSNTLETIPISHIKDEEEGKSCN 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1633 937 MobiDBLite consensus disorder prediction 221 239 - -
Dere09g1633 937 MobiDBLite consensus disorder prediction 46 68 - -
Dere09g1633 937 MobiDBLite consensus disorder prediction 741 762 - -
Dere09g1633 937 SUPERFAMILY Formin homology 2 domain (FH2 domain) 483 903 - -
Dere09g1633 937 MobiDBLite consensus disorder prediction 245 266 - -
Dere09g1633 937 SMART it6_source 470 901 IPR015425 -
Dere09g1633 937 MobiDBLite consensus disorder prediction 175 478 - -
Dere09g1633 937 MobiDBLite consensus disorder prediction 273 447 - -
Dere09g1633 937 Gene3D Formin, FH2 domain 477 911 IPR042201 -
Dere09g1633 937 ProSiteProfiles Formin homology-2 (FH2) domain profile. 470 912 IPR015425 -
Dere09g1633 937 MobiDBLite consensus disorder prediction 193 210 - -
Dere09g1633 937 Coils Coil 826 853 - -
Dere09g1633 937 MobiDBLite consensus disorder prediction 38 81 - -
Dere09g1633 937 Pfam Formin Homology 2 Domain 476 886 IPR015425 -
Dere09g1633 937 PANTHER FORMIN-RELATED 401 903 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1633 Dere-ChrDere09 20883642 20887112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1633 448 903 FH2 protein (formin) Gene Family AT1G70140 58.170 3.19e-178 533