Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1620 ATGGCCTTATCAATCAGTTTTCCTCTGTTAGTTATGATCCTATTATCAATCAATCTGAAACTTTTTCTTCACAATTCTCACACTCAATTGTGGTTCTATCTGAATTCAGAAATTACTAGCAGTGATGGGGAAAAAGCAGAACGTGAAAATGAGAGCAAGCACGAAAGTGAAAGCAGGAATGAGGCTGTTAAAACCATGAAGAAGGGAGGGAAAGTGCTTTTAAATGTGAAGCCGAAATATGGCTTAGGTGAGAAGGGAAACGCAGCACATAGTGGTGAAGATTATGAGCAAGTCATTGATGGGCTTGATAGGGCAGTGATGACTATGAAGAAGGGTGAAGTAGCGTCTTTTACTATTACGCCTGAGGATGCGTTTGCTTCATCTAAGTCCAAGCATGATTCGGCTTTACGAAGTTGA 417 0.4053 MALSISFPLLVMILLSINLKLFLHNSHTQLWFYLNSEITSSDGEKAERENESKHESESRNEAVKTMKKGGKVLLNVKPKYGLGEKGNAAHSGEDYEQVIDGLDRAVMTMKKGEVASFTITPEDAFASSKSKHDSALRS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1620 138 Gene3D - 88 136 IPR046357 GO:0003755
Dere09g1620 138 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 96 131 - -
Dere09g1620 138 MobiDBLite consensus disorder prediction 41 65 - -
Dere09g1620 138 MobiDBLite consensus disorder prediction 40 65 - -
Dere09g1620 138 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 96 131 IPR001179 GO:0003755
Dere09g1620 138 SUPERFAMILY FKBP-like 95 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1620 Dere-ChrDere09 20725390 20728799 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1620 54 93 Calmodulin-binding Proteins AT3G25230 62.500 3.82e-09 52.0