Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1614 ATGTCGGTTTCCTGCTCCGATGACTACTTCCGCGACTCCGACCTTCTTTGCTGCGAGGACACCTCTGGAATCTTGTCCGGAGAGTCGCCGGAATGCTCCTGCGACCTCGATTCCTCTTCATCATCGGTATTTCAGGAGGAGTCCATAGCCGGATTCATCGAAGAGGAGCGCAACTTCGTTCCCGGATTCGACTACTTGTCCCGATTTCAATCTCACTCGCTTGACGCCTCCGCCAGACAAGAATCCGTTGCATGGATTCTCAAGGTGCAGGCATTTTATGGTTTTCAGCCGCTGACGGCGTATCTTTCCGTCAACTATTTGGACCGGTTTTTGGATTCTCGGCAGTTGCCTCAAACAAATGGGTGGCCACTGCAACTTTTATCTGTTGCTTGTTTGTCTTTAGCGGCAAAGATGGAGGAACCCTTAGTTCCGTCGCTTTTGGATCTTCAGGTAGAAGGAGCCAAATATATATTTGAGCCAAGAACAATACGTAGGATGGAACTACTTGTTCTAGGTGTTTTGGATTGGAGGCTAAGATCAGTCACGCCATTCAGCTTCCTCGGTTTCTTTGCGTGCAAGCTCGATCCCACTGGAACTTTTACTGGGTTGCTCGTTTCCCGGGCTACAGAAATAATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCGTACTGGCCATCATGTATTGCTGCCGCGGCCATACTCTGTGCAGCTAATGAAATTCCAAATTGGTCTCTTGTTAAGCCTGAGCATGCTGAGTCATGGTGTGAGGGACTCAGAAAAGAGAAGATCATAGGCTGCTATCAGCTGATGCAAGAACTTGTGGTTGACGATAACCGGAGGAAGTCCCCTAAAGTCTTACCAAAGTTTCGAGTATCGATTCAGCCCAGAATGAGGACAAGCATTTTATCGTTGTCGTCGTCTTCGTCTTCGTCTTCCTCCTCCTTTTCGTCGCCTTGTAAAAGGAGGAAATTAAATAACTGCTCGTGGGTGGATGATGGCAAAGGAAACTCCCAGTGA 1020 0.4804 MSVSCSDDYFRDSDLLCCEDTSGILSGESPECSCDLDSSSSSVFQEESIAGFIEEERNFVPGFDYLSRFQSHSLDASARQESVAWILKVQAFYGFQPLTAYLSVNYLDRFLDSRQLPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQVEGAKYIFEPRTIRRMELLVLGVLDWRLRSVTPFSFLGFFACKLDPTGTFTGLLVSRATEIILSNIQEASFLAYWPSCIAAAAILCAANEIPNWSLVKPEHAESWCEGLRKEKIIGCYQLMQELVVDDNRRKSPKVLPKFRVSIQPRMRTSILSLSSSSSSSSSSFSSPCKRRKLNNCSWVDDGKGNSQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1614 339 FunFam D2/4-type cyclin 62 179 - -
Dere09g1614 339 Gene3D - 53 242 - -
Dere09g1614 339 PANTHER CYCLINS 52 279 IPR039361 -
Dere09g1614 339 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Dere09g1614 339 SUPERFAMILY Cyclin-like 182 291 IPR036915 -
Dere09g1614 339 Pfam Cyclin, C-terminal domain 181 291 IPR004367 -
Dere09g1614 339 CDD CYCLIN_AtCycD-like_rpt1 78 176 - -
Dere09g1614 339 Pfam Cyclin, N-terminal domain 51 178 IPR006671 -
Dere09g1614 339 SMART Cyclin_C_2 181 313 IPR004367 -
Dere09g1614 339 CDD CYCLIN_AtCycD-like_rpt2 181 271 - -
Dere09g1614 339 Gene3D - 62 179 - -
Dere09g1614 339 SMART cyclin_7 84 172 IPR013763 -
Dere09g1614 339 MobiDBLite consensus disorder prediction 304 324 - -
Dere09g1614 339 SUPERFAMILY Cyclin-like 43 178 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1614 Dere-ChrDere09 20634699 20637369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1614 1 339 Core Cell Cycle Gene Families AT1G70210 63.050 2.45e-144 409