Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1604 ATGCCGGCGCATCGATCGAAATCGGAGAAGCAGGATGCTGCGAAGCAGCTCCGTCGCGATCCCTATGAGGTCCTCGGCGTCTCGCGCAACTCGACAGATCAGGAAATCAAAACAGCTTACCGAAAAATGGCACTCAAATATCATCCTGACAAGAATGCTAATGATCCTAAAGCAGCTGACATGTTTAAAGAGGTCACCTTTTCGTATAACATCTTGTCAGATCCTGAGAAACGGCGTCAGTATGACTCAGCTGGTTTTGAGGCCGTTGAATCGGATAGCCAAGAATTGGAGCTGGATCTTTCAAGTTTAGGTGCTGTGAATACAATGTTTGCTGCTCTTTTCAGTAAACTTGGCGTGCCAATTAAGACAACTGTATCAGCAACTGTTTTGGAAGAGGCACTTAATGGTGTGGTAACAATTCGCCCACTTCCATTAGGGCATCCTATATCTAAAAGGGTTGAGAAGCAATGTGCTCACTTCTATTCAGTTACAATAACAGAAGAGGAAGCACGGGCTGGTTTTGTTTGTCGGGTGCAATCATCTGACAAAAGCAAGTTCAAGTTATTATATTTCGATCAGGAAGAGAATGGTGGATTGAGTCTTGCACTCCAGGAAGACAGTACAAAAACCGGAAAGTTTACCTCTGCTGGAATGTATTTTCTTGGTTTTCCTGTTTATCGGCTGGATCAAACAGCAAACTCAATAGCTGCTGCGAAGGATCCAGATACATCATTTTTCAGAAAGCTGGACGGGTTCCAACCATGTGAATTAACAGAATTGAAAGCTGGCACCCATGTTTTTGCTGTTTATGGTGACAATTTCTTTAAAAGTGCAAACTATACAATAGAAGCTCTATGTGCTGCACCTTTTAGTCAAGAGAAAGAGAGCCTCAGAAACGTAGAAGCTCAAATTTTATCTAAACGGGCAGAACTATCAAAATTTGAGAGTGAATATCGAGAGGTTCTGGCACAATTTACAGAGATGACAAACAGATATGCACAAGAAATGCAAGTGATTGATGAGCTTCTGAAGCAAAGGAATGAGATACATGCATCATATACTATTGTTCCATTAAAACGTAGTACAAGTAAGAGCAGGAGTAAAAGTTCGTCGAAAGAGGCTACAGAAGATGGCCAAGCAAGAGAGAAGAGATATACAAGAGACCGATCAAAGAAGAAGAAATGGTATAACATCCACTTAAGAGTTGATAAGAGAAAGGCTTGCTAA 1227 0.4165 MPAHRSKSEKQDAAKQLRRDPYEVLGVSRNSTDQEIKTAYRKMALKYHPDKNANDPKAADMFKEVTFSYNILSDPEKRRQYDSAGFEAVESDSQELELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGVVTIRPLPLGHPISKRVEKQCAHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEENGGLSLALQEDSTKTGKFTSAGMYFLGFPVYRLDQTANSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSANYTIEALCAAPFSQEKESLRNVEAQILSKRAELSKFESEYREVLAQFTEMTNRYAQEMQVIDELLKQRNEIHASYTIVPLKRSTSKSRSKSSSKEATEDGQAREKRYTRDRSKKKKWYNIHLRVDKRKAC 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1604 408 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Dere09g1604 408 PRINTS DnaJ domain signature 57 77 IPR001623 -
Dere09g1604 408 PRINTS DnaJ domain signature 77 96 IPR001623 -
Dere09g1604 408 PRINTS DnaJ domain signature 40 55 IPR001623 -
Dere09g1604 408 PRINTS DnaJ domain signature 22 40 IPR001623 -
Dere09g1604 408 FunFam Chaperone protein dnaJ 16 4 102 - -
Dere09g1604 408 MobiDBLite consensus disorder prediction 1 19 - -
Dere09g1604 408 Gene3D DnaJ domain 4 103 IPR036869 -
Dere09g1604 408 CDD DnaJ 20 74 IPR001623 -
Dere09g1604 408 Pfam DnaJ domain 20 82 IPR001623 -
Dere09g1604 408 Coils Coil 297 317 - -
Dere09g1604 408 SMART dnaj_3 19 77 IPR001623 -
Dere09g1604 408 MobiDBLite consensus disorder prediction 1 23 - -
Dere09g1604 408 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 407 - -
Dere09g1604 408 MobiDBLite consensus disorder prediction 360 390 - -
Dere09g1604 408 MobiDBLite consensus disorder prediction 366 385 - -
Dere09g1604 408 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Dere09g1604 408 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1604 Dere-ChrDere09 20523624 20527310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1604 13 83 C2H2 Transcription Factor Family AT1G74250 39.474 3.80e-11 63.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1604 09 20523624 20527310 Dere09g1604 09 20523624 20527310 ECH