Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1603 ATGGAAAAGCAATGTGTGTGTGATGTTTCCTGTACATGGGATGGTTCAGAGAATAATGGCCACTCTATGGAGAAGAGGCTCAAGTTATTTGGGTTTGAGCTAAACCCATCAAATAACAACAACAACAACACAAATGAAGGAGATGAAAGTGTGAACTCCTCTAACTCATCAGCAGTTTCTTCTTCAGGAGGAGGAGCAGACAAACCTGCTCAAGAGAAGATCTCAGAACTATCAAGAGACCCTTCTTCAGAGGAGAAGAAGTTTGAGTGTCAGTATTGCTTCAAGGAATTTGCAAACTCACAAGCATTAGGAGGCCACCAGAATGCCCACAAGAAAGAGAGAATGAAGAAGAAGAGGCTTCAGCTTCAAGCCAGGAAGGCTAGCCTTAACCACTACCTTCATCGTCAGCAAAGCAATAATTATTACCAATATTGTGGCTTTGGCTCTAATAATTATTCTCCTTCTTGGTTCTATGATCCCTCTTCCTATAATAACAACTCTGAGTTCACACTCTTCGAAGAATCCCAAATTAGCTTCAGATCATCTAATAATGACCATCATCATCATCATCACCTTCAAGACTCTTCTTCTAATTCTTGCATGTTCAACTTCTCCCATACAGATGATACTTATAGGCCTTTCATGTTCAAGCCTTCAGACCAGCAGATCAGCCATCATAGAAATAAAGCTTTGGATCTTCGACTAGGCCTAACCTTAAAGTCAAATACAAGGAGCACTCTAGGAAGGAAATGA 753 0.4064 MEKQCVCDVSCTWDGSENNGHSMEKRLKLFGFELNPSNNNNNNTNEGDESVNSSNSSAVSSSGGGADKPAQEKISELSRDPSSEEKKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQARKASLNHYLHRQQSNNYYQYCGFGSNNYSPSWFYDPSSYNNNSEFTLFEESQISFRSSNNDHHHHHHLQDSSSNSCMFNFSHTDDTYRPFMFKPSDQQISHHRNKALDLRLGLTLKSNTRSTLGRK 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1603 250 MobiDBLite consensus disorder prediction 33 64 - -
Dere09g1603 250 ProSitePatterns Zinc finger C2H2 type domain signature. 90 110 IPR013087 -
Dere09g1603 250 Gene3D Classic Zinc Finger 66 143 - -
Dere09g1603 250 ProSiteProfiles Zinc finger C2H2 type domain profile. 88 115 IPR013087 -
Dere09g1603 250 MobiDBLite consensus disorder prediction 33 82 - -
Dere09g1603 250 PANTHER ZINC FINGER PROTEIN 5 19 240 IPR044299 GO:0010090
Dere09g1603 250 SUPERFAMILY beta-beta-alpha zinc fingers 84 115 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1603 Dere-ChrDere09 20510129 20510881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1603 26 130 C2H2 Transcription Factor Family AT1G68360 46.429 1.81e-16 74.7