Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1596 ATGAAGAGCGAGATGCAGAGCGTAGTGATGACCATGGCTATGGTGGCTGGCCAGTTCGTGGAAGTGGGCATGAACACTCTGGTCAAGGCTGCCTCCTCCAATGGAATGAGTAAATATGTTTTCATTTTTTACTCAAACGCCTTGGCCTTCTGTCTTCTTCTTCCTTCCACCTTCATCTATCACAGAAAGAGAGTTCCTCCTCCAATCTCAAGCTCAGTTATCTGCAGAATAATTCTTGCTAGCTTGCTCAGCTGTGCAGCGCAGACACTGATGTACACGGGGGTAGGATTAAGCTCTCCCACTTTGGCGTCAGCTATGGTGGATCTTGTTCCAGCTTTTACCTTCATCCTTGCCGTTGTTTCCAGGATGGAAAATCTGGATTTGAAAGTGGGAAGCAGTCAGGCAAAAGCTATTGGTACAGTGGCGTCAATCACAGGAGCACTCGTTGTGACTTTATACAAAGGTCTTCCAATAATTACTTTTCAGTCCCTACCACGTAAGCCTCTGAGTTGGGTTTTGCTCTCTTACCCACACCCATCAAATTGGCTATTTGGAGGCTTTCTCCTTTCACTCTCTACTTTATGTATCTCTGTCTTGGTCATCGTCCAGACATGGATTCTCAAGGACTATCCAGCAGAGTTAATAATGACAACCATAAGTTGCGGTTTTGTGGTCCTTCTTTCTGTGATAGTGGCTCTCATCGCAGAGGGAAATTCATCAAAAGCTTGGATACTGAGGCCTGATATAGAATTGGTAGCCATATTTTATTCAGTAAGTAGAAACTGTACAAGAAACTACTTCGTTCTGAGCTGTAACTGGTGCAACTTTTACTTACTATTTGAGTTTCCTGATGATGGTTCATACATATACATATATATGCAGGCAATTTTTCTGATATCAATGCGAAGTGTTGTGTGCGCATGGGCATGTCGAAAAAAGGGACCAATTTACGTTGCTATGTTTAATCCTTTAGCGATGGTGATTGCACTGGGCATGGGGATCATATTTCTAAGAGACACTCTTTATCTAGGAAGCATGATCGGAGCTGCAGTAATAGCTACTGGGTTTTATGCAGTGATGTGGGGCCTGGCTCAAGAGGAGAAGATGGTGAGTGAGAAGAGGAAGAAGAAGAATGAAATCTGTAGCTCTGTATCATCTTCTACAACAACCCCTTTGCTACAAAATAAAACCACGGATGTGTAG 1203 0.4347 MKSEMQSVVMTMAMVAGQFVEVGMNTLVKAASSNGMSKYVFIFYSNALAFCLLLPSTFIYHRKRVPPPISSSVICRIILASLLSCAAQTLMYTGVGLSSPTLASAMVDLVPAFTFILAVVSRMENLDLKVGSSQAKAIGTVASITGALVVTLYKGLPIITFQSLPRKPLSWVLLSYPHPSNWLFGGFLLSLSTLCISVLVIVQTWILKDYPAELIMTTISCGFVVLLSVIVALIAEGNSSKAWILRPDIELVAIFYSVSRNCTRNYFVLSCNWCNFYLLFEFPDDGSYIYIYMQAIFLISMRSVVCAWACRKKGPIYVAMFNPLAMVIALGMGIIFLRDTLYLGSMIGAAVIATGFYAVMWGLAQEEKMVSEKRKKKNEICSSVSSSTTTPLLQNKTTDV 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1596 400 Pfam EamA-like transporter family 22 151 IPR000620 GO:0016020
Dere09g1596 400 MobiDBLite consensus disorder prediction 381 400 - -
Dere09g1596 400 PANTHER WAT1-RELATED PROTEIN 10 374 IPR030184 GO:0016020|GO:0022857
Dere09g1596 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
Dere09g1596 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 276 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1596 Dere-ChrDere09 20436956 20440783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1596 6 399 Nodulin-like Gene Family AT3G28050 39.850 3.89e-84 259