Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1590 ATGCAGAGCGTAGTGATGACAATGGCTATGGTGGCTGGCCAGTTCGTGGAAGTGGGCATGAACACTCTGGTCAAGGTTGCCTCCTCCAATGGAATGAGTAAATATGTTTTCATTTTCTACTCAAACGCCTTGGCCCTCTGTCTTCTTCTTCCTTCCACCTTCCTCTATCACAGAAAGAGAGTTCCTCCACCAATCTCAAGCTCAGTTATCTGCAGAATTATTCTGACTAGCTTGCTCAGCTGTGCAGCGCAAACACTGATATACACGGGGGTAGGATTAAGCTCTCCCACTTTGGCGTCAGCTATGGTGGATCTTGTTCCAGCTTTTACCTTCATCCTTGCCGTTGTTTCCAGGATGGAAAATCTGGATTTGAAAGTGGGAAGCAGTCAGGCAAAAGCTATTGGTACAGTGGTGTCAATCACAGGAGCACTCGTTGTGACTTTATACAAAGGTCTTCCAATAATTACTTTTCAGTCCCTACCACATAAGCCTCCGAGTTGGGTTTTGCTCTCTCACCCACACCCATCCAATTGGCTATTTGGAGGCTTTCTCCTTTCACTCTCTACTTCATGTATCTCTGTCTTGGTCATCGTCCAGACATGGATTCTGAAGGACTATCCTGCAGAGTTAATGATGACAACCATGACATGCGGTTTTGTGGTCCTTCTTTCTGCAATAGTGGCTCTCATTGCAGAGGGAAATTCATCAAAAGCTTGGATATTGAGGCCTGATATAGAATTGGTAGCCATATTTTATTCAGCAATTTTTCTGATATCGATGCGAAGTGTTGTGTACGCATGGGCATGTCGAAAAAAGGGACCAGTTTACGTTGCTATGTTTAATCCTTTAGGGATGGTGATTGCACTGGGCATGGGGATCATATTTCTTAGAGACACTCTTTATCTGGGAAGCATGATCGGAGCTGCAGTAATAGCTATTGGGTTTTATGCAGTGATGTGGGGGCTAGCTCAAGAGGAGAAGATGGTGAGTGAGAAGAGGAAGAAGAAGAATGAAATCTGTAGCTCTGTATCATCTTCTGCAACAACCCCTTTGCTACAAAATAAAACCATGGATGTGTAG 1080 0.4444 MQSVVMTMAMVAGQFVEVGMNTLVKVASSNGMSKYVFIFYSNALALCLLLPSTFLYHRKRVPPPISSSVICRIILTSLLSCAAQTLIYTGVGLSSPTLASAMVDLVPAFTFILAVVSRMENLDLKVGSSQAKAIGTVVSITGALVVTLYKGLPIITFQSLPHKPPSWVLLSHPHPSNWLFGGFLLSLSTSCISVLVIVQTWILKDYPAELMMTTMTCGFVVLLSAIVALIAEGNSSKAWILRPDIELVAIFYSAIFLISMRSVVYAWACRKKGPVYVAMFNPLGMVIALGMGIIFLRDTLYLGSMIGAAVIAIGFYAVMWGLAQEEKMVSEKRKKKNEICSSVSSSATTPLLQNKTMDV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1590 359 Pfam EamA-like transporter family 180 319 IPR000620 GO:0016020
Dere09g1590 359 Pfam EamA-like transporter family 19 147 IPR000620 GO:0016020
Dere09g1590 359 PANTHER WAT1-RELATED PROTEIN 7 333 IPR030184 GO:0016020|GO:0022857
Dere09g1590 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 321 - -
Dere09g1590 359 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1590 Dere-ChrDere09 20267748 20271499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1590 2 358 Nodulin-like Gene Family AT3G28050 45.028 2.16e-95 286