Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1584 ATGGCATCTAGATCATATGCTAATCTTCTAGAGTTAGCTGGTGGAGACTTATTGTGTGTCCCTCACACCCCAAGAGCTCTTCCAAGAGTTATGACAGTTCCTGGAATTATTTCCGACCAGGATGGTTATGGTAATAATGATGCAGATTCTGATGTTAGCTCTTCTGGGTGTCGGGAGCGGAAAATTATAGTGGCAAACATGCTGCCATTACAAGCTAAAAGAGATACAGAATCTGCTAAATGGTGTTTCAGTTTGGATGAGGATTCAATTTTATTACAATTGAAAGATGGTTTTTCTTCTGATACCGAGGTTATCTATGTGGGTTCTCTGAAGGTTGAAATAGATGCCAGTGAGCAGGAAGAACTTGCTCAGAAATTATTGGAGGATTTCAATTGTGTGCCTACCTTTCTACCACATGAACTCCAAAAGAAGTTTTATCTTGGCTTTTGTAAGCAGCAGCTGTGGCCACTTTTTCATTACATGCTACCTATGTTCCCAGATCATGGTGACCGCTTTGACCGCTTGCTTTGGCAGGCTTATGTTTCTGCAAACAAAATATTCGCAGACAAGGTTATGGAAATAATTAATCCTGATGATGATTTTGTTTGGGTACATGACTATCACTTGATGGTTTTGCCTACATTTCTGAGGAAGCGATATAATCGAGTTAAACTTGGATTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTCTGCCAGTACGAGATGAAATTCTGAGGGGATTGTTGAATTCCGACTTAATTGGTTTTCATACATTTGATTATGCTCGCCATTTCCTCTCTTGCTGTAGCAGAATGCTGGGTCTGGACTATGAATCTAAGCGGGGCCATATAGGACTTGATTACTTTGGCCGTACTGTATATATTAAAATTTTGCCTGTAGGTATTCACATGGGCAGACTTGAATCTGTATTAAATCTTCCTTCTACATCTGCTAAAATAAAAGAGATTCAGGAAGAGTTTAAAGGTAGAAAAGTGATTCTTGGTGTTGATGATATGGATATCTTTAAGGGCATCAGCTTGAAACTTCTAGCTATGGAGCAGCTGCTGCAGCAGAACGCAGATTTGCAGGGCAAAATTGTCCTAGTCCAAATTGTAAATCCTGCCAGGGGTTCAGGGAAGGATGTCCAGGAGGCAAAGAAGGAAACATATTTAATTGCCCAGAGGATCAATGATACATTTGGCTCCAAACAGTATTTACCTGTTATTCTTATTGATCGTCCAGTTCCTCGTTTTGAAAAGAGTGCTTATTATGCTGTAGCAGAGTGTTGCATTGTCAATGCTGTGAGGGATGGTATGAATTTAGTGCCATACAAATATGTTGTCTGCAGACAAGGAACTACTCAACTGGACAAAGCATTGGATAGAAAATGTGATTCTCCTCGCACAAGCATGCTTGTTGTGTCTGAGTTCATTGGTTGTTCCCCTTCTCTAAGTGGAGCAATTAGGGTCAATCCCTGGGATATTGATGCAGTTGCTGATGCTCTGAATTTGGCCATTACAATGTGTGATTCAGAGAAGCAATTAAGGCATGAGAAACACTATCGCTACGTCAGTTCTCATGATGTGGCTTATTGGGCACGCAGCTTCATGCAGGATTTGGAGAGAGCATGCATAGATCATGACACCAAAAGGTGCTGGGGAATAGGTTTGGGCCTTGGATTCAGAGTTGTTTCTCTTTCTCCTGGTTTTAGGAAGTTGTCTGTTGACCACCTTGTTTCAGCGTACAAGAGAACTAATAGAAGGGCCATATTTCTTGATTATGATGGTACAGTCGTACCACAATCTTCTATAAATAAAACCCCCAGCTCTGAAGTCATATCAGTGCTAAATACCTTGTGTAATGATGCCAAGAACAGTGTCTTCATTGTTAGTGGGAGGGGAAGAGATTCTCTTAGTGAGTGGTTTACTTCATGCAAAGGGCTGGGACTTGCAGCTGAACATGGGTACTTTTTAAGGTGGAATAGAGACTCAGAATGGGAAACCAGTCACTTGTCTGCTGACCTTGATTGGAAAAATATCGTGGAACCTATCATGACTTTGTATACAGAGGCAACTGACGGGTCTAATATTGAAATCAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCGGACCCTGATTTTGGTTCTTGCCAAGCAAAAGAATTGTTAAATCACCTGGAAAGTGTGCTTGCTAATGAACCGGCAGTTGTTAAGAGGGGCCAACATATTGTTGAAGTCAAGCCACAGGGAATAAGCAAGGGTTTGGTGGCAGATAAGGTTCTTTCGACTTTGGTAAATGGTGGGATCCCACCAGATCTTGTGATTTGCATTGGAGATGATCGATCGGATGAAGACATGTTTGAGAGCATACTAAGGACAGTCTCTTGTCCTTCATTGCCAGTTGCTCCGGAGATATTTGCATGCACCGTTGGGAGGAAGCCTAGCAAGGCCAAGTATTATCTTGATGATACCGCTGATGTTGTGAAATTGCTTCAAGGTCTTGCTACTGCATCAAATCCAAAGCCAAGGCACCTACCCCACTTCCAGGTTTCTTTTGAAAGCACAGTTTGA 2586 0.4176 MASRSYANLLELAGGDLLCVPHTPRALPRVMTVPGIISDQDGYGNNDADSDVSSSGCRERKIIVANMLPLQAKRDTESAKWCFSLDEDSILLQLKDGFSSDTEVIYVGSLKVEIDASEQEELAQKLLEDFNCVPTFLPHELQKKFYLGFCKQQLWPLFHYMLPMFPDHGDRFDRLLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGIHMGRLESVLNLPSTSAKIKEIQEEFKGRKVILGVDDMDIFKGISLKLLAMEQLLQQNADLQGKIVLVQIVNPARGSGKDVQEAKKETYLIAQRINDTFGSKQYLPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYVVCRQGTTQLDKALDRKCDSPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADALNLAITMCDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACIDHDTKRCWGIGLGLGFRVVSLSPGFRKLSVDHLVSAYKRTNRRAIFLDYDGTVVPQSSINKTPSSEVISVLNTLCNDAKNSVFIVSGRGRDSLSEWFTSCKGLGLAAEHGYFLRWNRDSEWETSHLSADLDWKNIVEPIMTLYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLNHLESVLANEPAVVKRGQHIVEVKPQGISKGLVADKVLSTLVNGGIPPDLVICIGDDRSDEDMFESILRTVSCPSLPVAPEIFACTVGRKPSKAKYYLDDTADVVKLLQGLATASNPKPRHLPHFQVSFESTV 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1584 861 CDD GT20_TPS 60 545 IPR001830 GO:0003824|GO:0005992
Dere09g1584 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Dere09g1584 861 Gene3D - 591 709 IPR023214 -
Dere09g1584 861 Gene3D - 721 851 IPR023214 -
Dere09g1584 861 FunFam Trehalose-6-phosphate synthase 2 675 754 - -
Dere09g1584 861 NCBIfam HAD-IIB family hydrolase 593 794 IPR006379 -
Dere09g1584 861 Gene3D Glycogen Phosphorylase B; 54 312 - -
Dere09g1584 861 NCBIfam trehalose-phosphatase 590 840 IPR003337 GO:0003824|GO:0005992
Dere09g1584 861 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 852 - -
Dere09g1584 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 841 IPR001830 GO:0003824|GO:0005992
Dere09g1584 861 FunFam Alpha,alpha-trehalose-phosphate synthase 314 529 - -
Dere09g1584 861 Gene3D Glycogen Phosphorylase B; 313 529 - -
Dere09g1584 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Dere09g1584 861 Pfam Glycosyltransferase family 20 60 545 IPR001830 GO:0003824|GO:0005992
Dere09g1584 861 Pfam Trehalose-phosphatase 595 829 IPR003337 GO:0003824|GO:0005992
Dere09g1584 861 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Dere09g1584 861 CDD HAD_TPP 593 834 - -
Dere09g1584 861 SUPERFAMILY HAD-like 592 840 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1584 Dere-ChrDere09 20159176 20161967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1584 1 861 Trehalose Biosynthesis Gene Families AT1G23870 74.740 0.0 1379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1584 09 20159176 20161967 Dere09g1584 09 20159176 20161967 ECH