Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1582 ATGGATCTGGAAAGTGGGATTCGTCAAAACTCTTCTAAGAAACAACCATGGAAGGCGATTCTGACTCTGGCATATCAGAGCCTTGGAGTTGTTTATGGAGATTTAAGCATTTCACCGCTATACGTGTACAGAAGCACGTTCGCTGAAGATATTGTACACACTGAGACTAACGAAGAGATTTATGGTGTTTTGTCTTTGGTTTTCTGGACTCTTACGTTGGTTCCTTTGATCAAATATGTGTTTATCGTGCTCAAAGCTGACGACAATAGTGAAGGAGGCACATTTGCTCTATACTCGTTGCTGTGTCGCCATGCCCGAGTAAGCTCACTGCACAATAGACAATTGGCAGACGAAGAGCTCTCGGAGTACAAGAATGACAGTTCTGTAGTAATACCGGAAAGAAGCTTTGCCGCGAGGATGAAGACCAAGTTGGAGAAGCATAAGGTTTTGCAGAAGATTTTGCTGATTCTGGCTTTGATTGGGACTTGCATGGTGATTGGTGATGGGATCCTCACGCCAGCTCTTTCTGTTTTCTCTGCCGTGTCTGGCCTTGAGCTTTCAGTGTCCAAGGAGCATCACCAATATGTAGAAGTTCCAGCTGCATGCATCATACTGATTGGCTTGTTTGCCCTTCAACATTACGGTACTCACAGGGTTGGCTTCTTGTTTGCTCCAATAGTTATCACGTGGCTTCTCTGCATCAGTGCTATTGGTGTATATAATATATTTTACTGGAATCCTCAAGTATATCAAGCACTCTCTCCATATTATGTTTTCCAATTTCTAAGGAAAACTCAAAGAGGAGGCTGGATGTCCCTTGGTGGAATTTTATTGTGCATAACAGGATCTGAAGCCATGTTCGCTGATCTTGGGCACTTTTCGCAATTATCAATCAAGCTTGCATTCACCTCTGTGGTCTATCCATCTCTTGTTCTTGCATATATGGGGCAAGCTGCATATCTATCTAAACACCATGACGTCATGTATGAGTACCATTTCGGGTTTTATGTATCTGTACCAGAGAAACTGAGATGGCCTGTTCTGGTAATAGCCATACTTGCTGCAGTTGTGGGAAGTCAAGCCATCATCACTGGAACTTTCTCGATTATCAAGCAGTGTTCTGCATTAAGTTGCTTCCCCAGGGTTAAAGTGGTACACACATCGTCCAAAATTCATGGCCAAATATATATCCCTGAGATCAATTGGCTATTAATGTTCTTGTGTTTGGCTGCAACTATTGGTTTCAGAGACACCAAGCGCTTGGGTAATGCATCAGGTTTGGCAGTTATAACAGTTATGCTGGTCACCACTTGTTTGATGTCTCTGGTTATAGTACTGTGCTGGCACCAGATGTTTCTGTTTGCCATTGTTTTTGTTGCTATATTTGGCACCATTGAGGCCCTCTTTTTCTCAGCTTCTCTTGTCAAGTTCCGTGAAGGAGCATGGGTTCCCATTGCTTTGGCCTTTGTATTTCTCACTGTCATGTATGTCTGGCACTATGGCACCCTCAAGAAGTATGAATTTGATGTCCAAAACAAGGTCTCCATCAACTGGCTACTCAGCCTAAGTCCCAGCATAGGCATTGTCCGTGTGCCAGGGATAGGCCTAATACACACCGAACTAGTTTCTGGAATCCCTGCAATCTTCTCCCACTTTGTGACCAACCTTCCAGCATTCCACCGAGTCCTAGTTTTTCTCTGCATCAAGCATGTGCCAGTTCCTCATGTCATGCCTAATGAACGATACCTAGTGGGCCGGATAGGGCCAAGAGAGTTCAGACTCTATCGGTGCATAGTACGCTATGGGTACCGTGACATCCACAAAGATGACATGGAATTTGAGACAGACCTTGTGTGTAGCATAGCAGAGTTCATTCGCACAGGAAGCAGTAGTACCGAGTTCAATGCTGCTTCTTCAAGCAAAGAGCTGGAAAAAAATGACAGAATGGCAGTTGTTGGGACATGTTCTACACATGCCATAACAATGAGGGAAGACACAGTGGATGATAACAACGCAGATTCACCCGGGACTTCAGAGATCCAGCCAAAGAAGAAGGTGAGCTTTATTGTACCAGAGAGTCCCAAGATTGACACTGGTGCTAGGGAGGAACTAGAGGAGCTTATGGAAGCAAGGGAAGCTGGGGTGGTTTACATTACAGGACAGTCTTATATGAGAGCCAAAGCTGGGTCTAGCTTGCTGAAAAAGTTAGTGATTAATGTTGGGTATGAATTCTTGAGGAGGAATAGTAGGGCACCTTCTTATGTTCGTGTACCTCATGCTTCTTCCCTGGAAGTTGGGATGATGTACCAGGTTTGA 2316 0.4439 MDLESGIRQNSSKKQPWKAILTLAYQSLGVVYGDLSISPLYVYRSTFAEDIVHTETNEEIYGVLSLVFWTLTLVPLIKYVFIVLKADDNSEGGTFALYSLLCRHARVSSLHNRQLADEELSEYKNDSSVVIPERSFAARMKTKLEKHKVLQKILLILALIGTCMVIGDGILTPALSVFSAVSGLELSVSKEHHQYVEVPAACIILIGLFALQHYGTHRVGFLFAPIVITWLLCISAIGVYNIFYWNPQVYQALSPYYVFQFLRKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKLAFTSVVYPSLVLAYMGQAAYLSKHHDVMYEYHFGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVVHTSSKIHGQIYIPEINWLLMFLCLAATIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQMFLFAIVFVAIFGTIEALFFSASLVKFREGAWVPIALAFVFLTVMYVWHYGTLKKYEFDVQNKVSINWLLSLSPSIGIVRVPGIGLIHTELVSGIPAIFSHFVTNLPAFHRVLVFLCIKHVPVPHVMPNERYLVGRIGPREFRLYRCIVRYGYRDIHKDDMEFETDLVCSIAEFIRTGSSSTEFNAASSSKELEKNDRMAVVGTCSTHAITMREDTVDDNNADSPGTSEIQPKKKVSFIVPESPKIDTGAREELEELMEAREAGVVYITGQSYMRAKAGSSLLKKLVINVGYEFLRRNSRAPSYVRVPHASSLEVGMMYQV 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1582 771 NCBIfam potassium uptake protein 23 771 IPR003855 GO:0015079|GO:0016020|GO:0071805
Dere09g1582 771 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 770 IPR003855 GO:0015079|GO:0016020|GO:0071805
Dere09g1582 771 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1582 Dere-ChrDere09 20139112 20144704 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1582 1 771 Inorganic Solute Cotransporters AT1G70300 74.809 0.0 1211
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1582 09 20139112 20144704 Dere13g1217 13 16882789 16889165 CCT
Dere13g1216 13 16862211 16868221 Dere09g1582 09 20139112 20144704 CCT
Dere09g1582 09 20139112 20144704 Dere09g1582 09 20139112 20144704 ECH