LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere09g1581	ATGGCAGCGAGTACCATTGAAGAGAGCAGTGTGAGGTTGTTGGCTAGTAGCAGTAGTGGTGGAAGCACAGGATCTAGGTGGGTCGATGGGAGTGAAGTGGAGTGGGAGGTAACTCCATGGACGAAGCAAGATGAGAAGGAGGGATTTGGATCAATCAGAAGGAGGCTTGTGAAGAAGCCCAAGAGAGTTGATTCGCTCGATGTAGAAGCCATGGAAATTTCTGGTATTCACGGCCACCACTCCAAGGATCCTTCCATTTGGACCACCCTTGCATTAGCTTTTCAGACTCTCGGTGTGGTATATGGTGACATGGGAACAAGTCCTCTATATGTGTTCACTGATGTCTTCAGCAAGGTTCCAATTGAGTCAGATTTGGATATCTTGGGGGCATTATCATTAGTGATGTACACAATAACAATTATACCATTAGCAAAGTATGTTTTTATAGTCCTCAAGGCAAATGACAATGGAGAAGGAGGAACATTTGCACTGTACTCGCTGATTTGCAGGTATGCAAATGTGAATCTGCTTCCAAATCGTCAGCAAGCTGATGAACATATCTCTAGCTTTAGGCTTAAACTACCCACTCCAGAGCTGGAAAGGGCTTTCACCATAAAGGATATTTTGGAAAAAAAGTCATCTTTGAAAATCCTTTTGTTGCTGTTAGTTCTAATGGGAACTTCCATGATTATCGGGGATGGTATTCTAACGCCAGCAATATCAGTAATGTCTGCTATAAGTGGTCTGCAAGGTCAAATTAAAGGATTCGAAACACAGGAGGTGGTCATTGTTTCAATTATAGTCCTGGTGGCTTTGTTCAGCATACAACAGTTTGGTACCGGTAAAGTGGGTTTCATGTTTGCCCCAATTCTAGCTTTATGGTTCTTTTCTCTGGCTTTTGTTGGGATACACAATATACTTAAGCATGACATCAGGGTTCTGAGAGCCTTCAATCCAGCTTATATCTATTATTTCTTCAAGAGGAACACCAAAACTGCATGGTCATCTCTTGGAGGCTGCGTTCTGTGTATTACAGGTGCTGAAGCAATGTTTGCTGATCTGGGTCACTTTTCTGTACCATCAATACAGATTGCCTTTACTTTTGTGGTATTTCCCTGTCTCCTCCTCGCTTATATGGGCCAAGCTGCTTATCTGATGAAGTACCCTTATACTCATCCAAGAATATTCTATGAATCTGTTCCAGATAGCCTCTTCTGGCCAGTGTTTGTGATAGCCACACTTGCTGCTATGATTGCTAGCCAAGCAATGATATCTGCTACGTTTTCATGTGTAAAGCAATCCATGGCTTTGGGCTGCTTTCCGAGGCTCAAGATAATTCACACCTCAAAAAAGTTTATGGGTCAAATATACATCCCTGTAATAAACTATTTTCTGTTGATCATGTGCATACTTGTTGTTTCCATCTTCCAGAGCACAACAAGTATTGCAAACGCATATGGCATTGCTGAAGTAGGTGTCATGATGGTTAGCACTACCTTGGTGGGTCTTGTAATGCTGCTGATCTGGCAGACCAACTTGTTCTTGGTTTTTAGTTTCCTATTCGTCTTTGGAACAGTGGAGCTCATTTACATGTCTTCTGTCCTATCAAAAATCACAGAGGGTGGCTGGCTTCCGCTTGCCTTTGCTTCCTTTTTCCTCTCTGTAATGTACACATGGAACTATGGGAGTGTACTGAAATACCGAAGTGAAGTAAGGGAGAAGATCTCGATGGACTTGATGCTTGATCTTGGCTCCAATCTTGGAACTGTAAGAGTACCAGGAATAGGATTGCTATATAACGAGCTTGTCCAAGGCATTCCCTCCATTTTTGCACAGTTACTCTTGAGCCTCCCCGCTGTCCACTCTACTGTAGTCTTTGTTTGCATCAAATATGTTCCAGTCCCAGTGGTTCCTCTAGAGGAAAGATTCCTATTTCGAAGAGTCTGCCCAAAAGATTACCATATGTTTCGCTGTGTTGCCAGGTATGGCTACAAAGATGTGAGGAAGGAAGATCATCATGCATTTGAGCAGCTTCTTATCGAAAGCCTTGAGAGATTCTTGAGAAAGGAGGCTCAACATAGTTCCTGGGAGGTCGACAAACACAAGGATATGGGTAGTGTCTCAGTGATATCAGAGGATGCTGATCTTCCCAGTGGGAATGTGGCTGAGGAGCTGAGGATTCCACTGATGCGGGGTCAAAAACCAGAAGAAACAGTAGCTTCTACCTCTCGGCAAGCTTCATCCTCGCTGCCATCTAGTTTCATGTCATCAGATGAAGACCCTAGTCTTGAATACGAGCTTGCAGCTCTGAGAGAAGCAACGGATTCAGGATTCACCTATTTGCTTGGACATGGGGATGTGAGAGCAAAGAAGAACTCCATTTTCATCAAGAAGCTGGTGATCAATTATTTCTACGCATTTCTGAGAAAAAACTGCAGAGGAGGTACAGCAAACATGAGAGTACCTCACACCAATATCATTCAAGTGGGAATGACATACATGGTCTGA	2508	0.433	MAASTIEESSVRLLASSSSGGSTGSRWVDGSEVEWEVTPWTKQDEKEGFGSIRRRLVKKPKRVDSLDVEAMEISGIHGHHSKDPSIWTTLALAFQTLGVVYGDMGTSPLYVFTDVFSKVPIESDLDILGALSLVMYTITIIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEHISSFRLKLPTPELERAFTIKDILEKKSSLKILLLLLVLMGTSMIIGDGILTPAISVMSAISGLQGQIKGFETQEVVIVSIIVLVALFSIQQFGTGKVGFMFAPILALWFFSLAFVGIHNILKHDIRVLRAFNPAYIYYFFKRNTKTAWSSLGGCVLCITGAEAMFADLGHFSVPSIQIAFTFVVFPCLLLAYMGQAAYLMKYPYTHPRIFYESVPDSLFWPVFVIATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSKKFMGQIYIPVINYFLLIMCILVVSIFQSTTSIANAYGIAEVGVMMVSTTLVGLVMLLIWQTNLFLVFSFLFVFGTVELIYMSSVLSKITEGGWLPLAFASFFLSVMYTWNYGSVLKYRSEVREKISMDLMLDLGSNLGTVRVPGIGLLYNELVQGIPSIFAQLLLSLPAVHSTVVFVCIKYVPVPVVPLEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLERFLRKEAQHSSWEVDKHKDMGSVSVISEDADLPSGNVAEELRIPLMRGQKPEETVASTSRQASSSLPSSFMSSDEDPSLEYELAALREATDSGFTYLLGHGDVRAKKNSIFIKKLVINYFYAFLRKNCRGGTANMRVPHTNIIQVGMTYMV	835

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere09g1581	835	MobiDBLite	consensus disorder prediction	1	26	-	-
	Dere09g1581	835	MobiDBLite	consensus disorder prediction	736	758	-	-
	Dere09g1581	835	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	85	833	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere09g1581	835	Pfam	K+ potassium transporter	93	666	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere09g1581	835	MobiDBLite	consensus disorder prediction	1	30	-	-
	Dere09g1581	835	NCBIfam	potassium uptake protein	92	835	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Dere09g1581	835	MobiDBLite	consensus disorder prediction	732	758	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere09g1581	Dere-ChrDere09	20121017	20133370	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere09g1581	6	835	Inorganic Solute Cotransporters	AT1G60160	73.501	0.0	1228