Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1578 ATGGCTACCTCCATGAGGATCTCAAGGCTTCTCTCTCCTTCCTCCTCCGCTTCTTTGTTCTCTCGAGGTAGAAATAGTCACCTGGCTAAATGGCTCAAAAATTATAGTGCTGCTTCTTCTGCTGCTGCTCCTACTGAAGAACCACTTAAGCCATTAGTTGAAGTACAACACACAGCTCTTAATCGATGGACAATTTGAAAAACTTTTGCGACCTTGGACCCGAGGACAGGAGACGCGATTGCTGATGTTGCGGAGGGCGATTCTGAAGATGTAGATCGAGCAGTTGCAGCTGCACGCAAGGCATTCGATGATGGGCCTTGGCCAAGAATGACTGCCTACGAGAGGCAGAAGACAATGTTGCGTGCTGCAGATCTGCTTGAAAAGCATAACGATGAGCTTGCAGCACTTGAGACTTGGGACAGCGGGAAGCCGTATGAACAATCTTCTCAAGTTGAAATTCCACTGCTTGTTCGTCTATTTCGATATTATGCTGGTTGGGCAGATAAGATTCACGGTCTCACAGTTCAAGCTGATGGGCCACTTCATGTGCAAACGTTGCACGAACCGATTGGTGTTGCAGGCCAAATTATTCCGTGGAATTTCCCTCTTCTCATGTTTGCTTGGAAGGTCGGACCCGCATTAGCCTGTGGCAACACTGTTGTTCTTAAAACAGCTGAGCAGACACCATTGTCTGCACTGTATGCAGCAAAGCTAATTCATGAGGCCGGACTTCCCTCTGGTGTTTTGAATGTAATTTCTGGCTTTGGTCCAACTGCTGGAGCAGCTCTTGCTAGTCACATGAAGGTGGACAAGCTTGCATTTACTGGTTCAACTGACACTGGAAAAGTAGTTCTTGAATTGGCAGCAAAAAGCAATCTCAAGCCTGTGACTTTGGAGCTTGGTGGGAAATCCCCTTTTATTGTATGTGAAGATGCTGATGTAGATCAAGCTGTAGAGCTAGCACACTTTGCATTATTCTTTAATCAGGGACAATGCTGCTGTGCTGGGTCTCGTACATTTGTACATGAGCGTGTGTACGATGAGTTTGTTATGAAAGCTAAGGCACGTGCTTTGAAACGAGTTGTTGGGGATCCATTTAAGGAGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTAAGAAGATACTGCAGTATATTAGATCCGGTGTTGAAAATGGAGCCACTCTTGAAACTGGAGGAGAGAGACTTGGTGACAAGGGCTTCTATATTAAGCCTACTGTGTTCTCCAATGTTCAGGATGGCATGCTGATTGCGAAGGAAGAGATATTTGGTCCAGTGCAATCCATTTTGAAATTCACGGACCTTGATGAGGTGATTCAAAGAGCAAATAACTCACACTATGGCCTTGCAGCAGGGGTCTTCACGCAAAACTTAGACACTGCAAACAAGCTGACTCGAGCACTGCGAGTAGGAACAGTATGGATAAATAGCTTTGACACATTTGATGCTGCAATTCCTTTTGGTGGGTATAAGATGAGTGGGCAGGGCAGAGAAAAAGGGATTTACAGTCTTCACAACTACTTGCAAGTGAAGGCTGTTGTAACTTCCTTGCAGAACCCAGCATGGCTTTGA 1599 0.4559 MATSMRISRLLSPSSSASLFSRGRNSHLAKWLKNYSAASSAAAPTEEPLKPLVEVQHTALNRWTIXKTFATLDPRTGDAIADVAEGDSEDVDRAVAAARKAFDDGPWPRMTAYERQKTMLRAADLLEKHNDELAALETWDSGKPYEQSSQVEIPLLVRLFRYYAGWADKIHGLTVQADGPLHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYAAKLIHEAGLPSGVLNVISGFGPTAGAALASHMKVDKLAFTGSTDTGKVVLELAAKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVMKAKARALKRVVGDPFKEGIEQGPQIDSEQFKKILQYIRSGVENGATLETGGERLGDKGFYIKPTVFSNVQDGMLIAKEEIFGPVQSILKFTDLDEVIQRANNSHYGLAAGVFTQNLDTANKLTRALRVGTVWINSFDTFDAAIPFGGYKMSGQGREKGIYSLHNYLQVKAVVTSLQNPAWL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1578 532 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 298 305 IPR029510 GO:0016491
Dere09g1578 532 SUPERFAMILY ALDH-like 66 527 IPR016161 GO:0016491
Dere09g1578 532 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 51 522 - -
Dere09g1578 532 FunFam Mitochondrial aldehyde dehydrogenase 2 304 493 - -
Dere09g1578 532 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 326 337 IPR016160 GO:0016491
Dere09g1578 532 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 60 316 - -
Dere09g1578 532 Pfam Aldehyde dehydrogenase family 67 522 IPR015590 GO:0016491
Dere09g1578 532 CDD ALDH_F2BC 55 524 - -
Dere09g1578 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 493 IPR016163 GO:0016620
Dere09g1578 532 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 67 522 IPR016162 GO:0016491
Dere09g1578 532 FunFam Aldehyde dehydrogenase, putative 494 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1578 Dere-ChrDere09 20088846 20093658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1578 6 532 Aldehyde Dehydrogenase Gene Family AT3G48000 73.371 0.0 823