Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1566 ATGCTCAATGTGGTGAATGGTGATACGTTAAGCCTTTTGGCAAACATGTCTGCCTCTGCTACACTCTCCTCCACAACTTCCCAGCTCAGGACCCTTCCCTCATCTCTCCCTCCCACCGCCAACACCACCATCTCTCCACCATCTTCTCTCAGATTTTCCCTCGCATTCCGGGAAAATAGAAAACAAATCACACCCACAAGCACCTCCATCCAAAAACGTTCACTTTCTTCAGCTAGGACTGGCAGAGTTGTGGTCAAATCCCAGACCACTAGTGCTCCTGCTTCTTCTGAGGCCGTCAAGGTCACACCCGTACCTTCCCAGATGAAAGCCTGGGTTTATGGGGAATATGGGGGCGTTGATGTTTTGAAGTTTGATTCGAATGTTGGTGTTCCTGATTTTAAGGAGGATGAGGTGCTTATTAAGGTTGTCGCTGCGGCTCTTAACCCCGTTGATGCCAAGAGGAGGCAGGGCAAGTTCAAGGCCACTGATTCGCCCCTTCCGACTGTTCCAGGTTATGATGTTGCCGGCGTCGTGGCAAAGGTTGGTAGTCAAGTGAAAGACTTCATAGTGGGTGATGAAGTCTATGGGAATATAAATGAGAAAGCACTAGAGGGTCCTAAGCAGTTTGGATCTCTGGCAGAGTACACTGCTGTTGAAGCAAAATTGTTAGCACCAAAACCTAAGAATTTGGGCTTTGCTCAGGCTGCTGGTCTTCCTCTTGCAATTGAGACAGCCTATGAGGGTCTAGAGAGGACCGGCTTTTCTAGCGGTAAATCTATTCTTGTTCTGAATGGTTCTGGTGGAGTTGGAAGCCTTGTGATTCAGCTAGCTAAGCAAGTTTTTGGAGCTTCAAGAGTCGCAGCCACATCAAGCACTAGAAATTTAGATCTGCTAAAGAGTTTGGGTGCTGATTTGGCAATTGACTACACAAAGGAGAACTTTGAAGATTTACCAGAAAAATTTGATGTAGTTTATGATGCCATTGGGCAATGTGACCGGGCGGTGAAGGCTATAAAAGAAGGAGGAAGTGTGGTAGCCCTCACTGGCGCTGTTACACCCCCAGGCTTCAGATTTGTTGTCACTTCCAATGGAGATGTGCTGAGGAAACTGAACCCTTATTTAGAGAGTGGAAAGGTGAAGCCAGTTGTAGACCCCAAAGGTCCATTCTCCTTTGCTCAGGTTGTCGATGCCTTCTCATACCTTGAAACCAATAGAGCAACTGGAAAAGTTGTTATACATCCAATTCCTTAG 1251 0.47 MLNVVNGDTLSLLANMSASATLSSTTSQLRTLPSSLPPTANTTISPPSSLRFSLAFRENRKQITPTSTSIQKRSLSSARTGRVVVKSQTTSAPASSEAVKVTPVPSQMKAWVYGEYGGVDVLKFDSNVGVPDFKEDEVLIKVVAAALNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVAKVGSQVKDFIVGDEVYGNINEKALEGPKQFGSLAEYTAVEAKLLAPKPKNLGFAQAAGLPLAIETAYEGLERTGFSSGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLDLLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKAIKEGGSVVALTGAVTPPGFRFVVTSNGDVLRKLNPYLESGKVKPVVDPKGPFSFAQVVDAFSYLETNRATGKVVIHPIP 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1566 416 Gene3D - 249 363 - -
Dere09g1566 416 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 257 278 IPR002364 GO:0008270|GO:0016491
Dere09g1566 416 SUPERFAMILY GroES-like 105 262 IPR011032 -
Dere09g1566 416 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 99 416 IPR044626 GO:0016628
Dere09g1566 416 Gene3D - 115 412 - -
Dere09g1566 416 SMART PKS_ER_names_mod 117 412 IPR020843 GO:0016491
Dere09g1566 416 Pfam Alcohol dehydrogenase GroES-like domain 136 199 IPR013154 -
Dere09g1566 416 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 230 354 IPR036291 -
Dere09g1566 416 CDD MDR_like_2 108 412 - -
Dere09g1566 416 Pfam Zinc-binding dehydrogenase 301 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1566 Dere-ChrDere09 19956996 19960086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1566 136 359 Monolignol Biosynthesis Gene Families AT3G19450 25.681 7.28e-07 48.9