Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1534 ATGGAAATGGAAGCCCCAGAATCAGATCATCACTCTCACAAAGACTCCTCGCAACAACCAAAGTTCGCTCTTCCCGTGGACTCTGAACACAAAGCCACAGAGTTCAGACTGTTCTCAATCGCTAAGCCTCACATGCGTGCATTCCACCTCTCATGGATCTCCTTCTTCTCCTGCTTCGTCTCCAGCTTCGCCGCGCCCCCTCTCCTTCCTATCATCCGAGACAACCTCAACCTCACCGCCACTGACATCGGCAACGCTGGCGTAGCCTCTGTCTCTGGCACCGTCTTCGCTCGTATCGCCATGGGCACTGCCTGTGACCTCTTCGGGCCCCGCCTGGCTTCCGCCTCCCTCATTCTCCTCTCTGCCCCCGCCGTCTTCCTCACCTCCCTCATCAACTCCCCCACTTCCTTCCTCCTCGTCCGCTTCTTCACCGGCTTCTCCCTCGCCACCTTCGTTTCCACCCAGTTCTGGATGAGCTCCATGTTCACCTCCTCCGTCGTCGGCTCCGCGAACGGCATCGCGGCCGGGTGGGGCAACCTCGGAGGAGGCGCCACCCAGCTCATAATGCCGTTAGTATTCGACGTCATCCGCGGCATCGGATCGACGCAATTTACAGCATGGCGCATTGCGTTCTTCATTCCCGCGCTTTTTCAAATGTCGACAGCTTTCGCGGTGCTAATATTTGGGCAAGACATGCCGGACGGGAACTTCCATGGGTTGAAAAAATCAGGGGAGAAGGCGAAGGATGATTTTTCTAGGGTTTTGTATCACGGGGTTATGAATTACAGAGGGTGGATTCTGGCGTTGACGTATGGGTATTGCTTTGGGGTGGAACTGACGGTGGATAATATAATAGCGGAGTATTTTTTTGACAGGTTTGATCTAAAGCTTCGCACGGCGGGGATGGTGGCAGCTAGCTTTGGGTTGGCAAACGTGGTGGCGCGGCCGGCGGGAGGGTTTATTTCGGATTCGATGGCGAGGAGGTTTGGGATGAGGGGGAGGCTATGGGCGTTGTGGATTTGTCAAACGTTGGGAGGAGTTTTCTGCATAATTCTTGGGCTTGTGGGGTCATTGGAGGCTTCTATCGTAGTGATGATCATATTCTCTGTGTTCGTTCAAGCTGCTTGTGGCCTCACTTTTGGAGTGGTTCCTTTTGTGTCAAGAAGGTCACTGGGGGTGATATCTGGAATGACAGGAGGTGGAGGGAATGTGGGGGCAGTGGTGACACAACTAATATTCTTCAAGGGATCAAACATTCTCCAAGGAAAGAGGGATAACCCTAATGGGAGTGATGATTGTGGTATGCACCCTCGCCATATGTCTAATCCACTTCCCTCAATGGGGCAGCATGTTCTTGGGGCCATCCTCCTCCAGAAAGGTCACCGAAGAAGACTACTATCTCTCCGAATGGAACTCCAAGGAGCAGCAGAAAGGCTTCCATAA 1443 0.535 MEMEAPESDHHSHKDSSQQPKFALPVDSEHKATEFRLFSIAKPHMRAFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGTVFARIAMGTACDLFGPRLASASLILLSAPAVFLTSLINSPTSFLLVRFFTGFSLATFVSTQFWMSSMFTSSVVGSANGIAAGWGNLGGGATQLIMPLVFDVIRGIGSTQFTAWRIAFFIPALFQMSTAFAVLIFGQDMPDGNFHGLKKSGEKAKDDFSRVLYHGVMNYRGWILALTYGYCFGVELTVDNIIAEYFFDRFDLKLRTAGMVAASFGLANVVARPAGGFISDSMARRFGMRGRLWALWICQTLGGVFCIILGLVGSLEASIVVMIIFSVFVQAACGLTFGVVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSNILQGKRDNPNGSDDCGMHPRHMSNPLPSMGQHVLGAILLQKGHRRRLLSLRMELQGAAERLP 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1534 480 MobiDBLite consensus disorder prediction 1 21 - -
Dere09g1534 480 Pfam Major Facilitator Superfamily 52 408 IPR011701 GO:0022857|GO:0055085
Dere09g1534 480 SUPERFAMILY MFS general substrate transporter 33 413 IPR036259 -
Dere09g1534 480 FunFam High affinity nitrate transporter 2.5 40 236 - -
Dere09g1534 480 Gene3D MFS general substrate transporter like domains 39 236 IPR036259 -
Dere09g1534 480 FunFam Nitrate transporter 2.1 248 426 - -
Dere09g1534 480 MobiDBLite consensus disorder prediction 1 17 - -
Dere09g1534 480 Gene3D MFS general substrate transporter like domains 247 422 IPR036259 -
Dere09g1534 480 CDD MFS_NRT2_like 48 418 IPR044772 GO:0015112
Dere09g1534 480 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 10 418 IPR044772 GO:0015112
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1534 Dere-ChrDere09 19699897 19702876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1534 1 418 Inorganic Solute Cotransporters AT1G12940 73.684 0.0 637