Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1524 ATGAATTGCTCTGCGACTATCCCCAGATGCAATGCCTTACTATACCACGTAACCCACGGTCTCCGGACAGAAGATATTGCATCTTTCTTCTCTGTCAGGCAGATTTATAGTGGGCAAGCATGGGTTGTGGGAAATCATACTGTTTTGAAACCAAATGAGGATTTAAAGATATATCTTCCATGTGGGTGTTCAGAAAGAAAGTCTCAAATTGTTGTGACGTATACGGTGCAGAAGGATGATATTCCCTCGGCGATCGCTGATATGCTAATGGCTGGAGTGGATAACATGAATGGCATGAACAGGATTTTAGCTCAAAATCCGTCGTTTATAGATGTGGGGTGGGTACTATTCGTTCCCAAAGAGTTAAATGGCCTTTCATCCATCAACATTGATGATGCTAAAGGAACTATAAGGGATGGTATTGAAACAGGTTATCAGCCTCTTTCTTGGAATGCAAGAGTACAGATTGCTCTGGATGCTGCAAAAGGTCTGGAATACATACATGATTACACGAAAGCACAATATGTCCACCGTGATGTAAAGACATGCAATTTTCTTCTTGATGAGAATCTCAGAGCAAAGATCTGTGAAGGAGCTTCAGGAGTAGGTAGTAATGGTGGTAACGAAGGTTTGGATGCAGTCATTGTAGAGGTGACAGGTGCTGGTGACAAAGGGTTGGAGGAAACAGAGACTGCTGGTAACAATGGAGTTTTAGGACAAGAAACAGAAGTGAATTTTATGCAGATGACAGAGTTAGCAGAGCGATGCTTAAGGGAAGATCCAGTTAAGAGGCCTGAAATGAGGGAGATAGTTGGGGCATTATCACAGCTTGTGATGTCCTCCATAGAGTGGGAAGCATCACTACGTGGAAATAGCCAGGTCTTCAGCCTCTTGTTTAATGGAAGATGA 909 0.429 MNCSATIPRCNALLYHVTHGLRTEDIASFFSVRQIYSGQAWVVGNHTVLKPNEDLKIYLPCGCSERKSQIVVTYTVQKDDIPSAIADMLMAGVDNMNGMNRILAQNPSFIDVGWVLFVPKELNGLSSINIDDAKGTIRDGIETGYQPLSWNARVQIALDAAKGLEYIHDYTKAQYVHRDVKTCNFLLDENLRAKICEGASGVGSNGGNEGLDAVIVEVTGAGDKGLEETETAGNNGVLGQETEVNFMQMTELAERCLREDPVKRPEMREIVGALSQLVMSSIEWEASLRGNSQVFSLLFNGR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1524 302 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 143 196 IPR044812 GO:0019199|GO:0045087
Dere09g1524 302 ProSiteProfiles Protein kinase domain profile. 29 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1524 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Dere09g1524 302 Gene3D LysM domain 68 124 IPR036779 -
Dere09g1524 302 Gene3D Transferase(Phosphotransferase) domain 1 133 200 - -
Dere09g1524 302 SUPERFAMILY Protein kinase-like (PK-like) 135 196 IPR011009 -
Dere09g1524 302 Pfam Protein tyrosine and serine/threonine kinase 106 197 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1524 Dere-ChrDere09 19542649 19552836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1524 134 302 Receptor kinase-like Gene Family AT1G51940 35.897 9.51e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Dere09g1524 PK_Tyr_Ser-Thr 1.4e-07 CL0016