Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1523 ATGGCACGCTTTCTTATTACCACCCTTCTCCTGTTCAACCTCCTCATCGTTCCTTCCTGCGCACAAGAGCCAGAAACTATGATCGTCGACGATGATGCACAACAACAGCCACAACCTGTGGATGACGTACTACAACGATTAGCTGATGTTATATTTGGACATGTCGACGGTGCACAACAAGAGCTACAACAACGACAACTTGTGGACGACGCTGAACAACAACCACAACCACAACCAGTTGTAGAACAGGACGACGCTGCACAGCAACAGCCACAGCCTGTCGCCGGTGCAGAAAAACAGCCACAGCCTGTGGACGGCACACGACAACAACCACAACCTATCGCCGGTGCAGAAAAACAGCCACAGCCTGTGGACGGCACACAACAACAACCACAACCTATCGCCGGTGCAGAACAACAGCCACAACCTGTGGACGGCGCACAACAACAACAACCACAACAGGTCGACGAACAGCCAACAAAAAAAGTTAAAAAGATCCACAGACTTAAGGAAGGGTTCTACAACATCAGTTGCCCAGATGCTGAGAAAATTGTGGCTGAACACATTAACGCACTTTTCTTGAATGACCCTATGGTAGTTGCAAGCTTCATTCGTCTTCTGTTCCATGATTGCTTCGTTAATGGATGCGATGCGTCGCTGCTGTTAGACTCGACGGATAATGGGGATAAAGTAGAGAAAGGTTCAAGAAATAACGGCGAACTCTTGAAAGGCGTCGAACATATCGACGACATCAAAGAGAAGCTGGAGGAACGATGTCCTGGAAGAGTGTCATGTTCTGATATACTGTCATTTTCCGCCATGGAAGCTATGGCCCTCGCCGGGATACCTCGTCGTCCTTATCTGGGAGGTCGCAGGGACGGAATGATCTCCCTTGCTTCTCAAGTAGACATAGACCAAAACCTGCCTCTCCCAGACTGGACCATGGACCAAATTATCGAACTCTACGGAAGGAAAGGGTTCACCATCGAAGACCTGGTGGTTCTGGGTGGTGCTCACTCGATTGGTAGGGCTCACTGTAGTGTCTTCAAGAACAGGATCGTCGGGTACGGTGGTGCAGCCGACGGAGCAGACCCTGGCATGCCGAAGCAACTCGCAAGTGAACTGGACAAACTATGCAAGCCACCAGGCACGACGGAGGCAAGAGCGAATCCTACTGTGAACTTCGATGAGACACCCACAATACTGGATAATCTCTTCTTTAAGAATCTGGTGGGAAAAAAGAAGGCATTGCTGGCTTCAGATCAGAATTTGCTCAACGATCCTAGGACTTCTCCGTTTGTGCATCAGTTTGCAGAGGATCAAGTGTTGTTTCAGAACAAGTTTGCCGATGCAATGGTTCGCTTGTCTTCCATAGATGTGCTTCTGGGGAGGAAGAGAGGGGAGATAAGAAAGACTTAATTGCTATTTGCTAGATCTGTAAGAGAAGATAAGATGCCATTTAGCCTCGAATTAGTAAGTCAAGCAACTAGGTTGCCGTTAAGGAGAAAATGGGGAGGGAAGGAGGATAAAATTGAAGGTCCCTTTTTCTTTTTCTTTTTCTTTTTTTCTCGAATGGGTGGAAACTCCCTTTACATTGGGTTGAATGTGAAGGCACATTCTCCAGTTATAAGCAAGAGATGCTGA 1644 0.4787 MARFLITTLLLFNLLIVPSCAQEPETMIVDDDAQQQPQPVDDVLQRLADVIFGHVDGAQQELQQRQLVDDAEQQPQPQPVVEQDDAAQQQPQPVAGAEKQPQPVDGTRQQPQPIAGAEKQPQPVDGTQQQPQPIAGAEQQPQPVDGAQQQQPQQVDEQPTKKVKKIHRLKEGFYNISCPDAEKIVAEHINALFLNDPMVVASFIRLLFHDCFVNGCDASLLLDSTDNGDKVEKGSRNNGELLKGVEHIDDIKEKLEERCPGRVSCSDILSFSAMEAMALAGIPRRPYLGGRRDGMISLASQVDIDQNLPLPDWTMDQIIELYGRKGFTIEDLVVLGGAHSIGRAHCSVFKNRIVGYGGAADGADPGMPKQLASELDKLCKPPGTTEARANPTVNFDETPTILDNLFFKNLVGKKKALLASDQNLLNDPRTSPFVHQFAEDQVLFQNKFADAMVRLSSIDVLLGRKRGEIRKTXLLFARSVREDKMPFSLELVSQATRLPLRRKWGGKEDKIEGPFFFFFFFFSRMGGNSLYIGLNVKAHSPVISKRC 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1523 547 ProSitePatterns Peroxidases active site signature. 200 211 IPR019794 GO:0004601
Dere09g1523 547 FunFam Peroxidase 309 455 - -
Dere09g1523 547 PRINTS Haem peroxidase superfamily signature 263 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Haem peroxidase superfamily signature 395 410 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Haem peroxidase superfamily signature 200 214 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Haem peroxidase superfamily signature 281 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Haem peroxidase superfamily signature 331 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 MobiDBLite consensus disorder prediction 61 163 - -
Dere09g1523 547 PRINTS Plant peroxidase signature 450 463 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Plant peroxidase signature 202 222 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Plant peroxidase signature 262 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Plant peroxidase signature 410 427 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Plant peroxidase signature 243 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Plant peroxidase signature 178 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Plant peroxidase signature 281 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PRINTS Plant peroxidase signature 330 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 PANTHER - 167 472 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 MobiDBLite consensus disorder prediction 103 157 - -
Dere09g1523 547 Gene3D Peroxidase, domain 2 309 455 - -
Dere09g1523 547 ProSitePatterns Peroxidases proximal heme-ligand signature. 331 341 IPR019793 -
Dere09g1523 547 Gene3D - 172 472 - -
Dere09g1523 547 MobiDBLite consensus disorder prediction 61 96 - -
Dere09g1523 547 SUPERFAMILY Heme-dependent peroxidases 169 471 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 ProSiteProfiles Plant heme peroxidase family profile. 168 477 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 Pfam Peroxidase 186 440 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere09g1523 547 CDD secretory_peroxidase 169 471 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1523 Dere-ChrDere09 19511158 19515189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1523 169 470 Peroxidase AT5G51890 38.079 8.34e-65 212