Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1487 ATGGCAGACAACTTGGACGACGCGACCTCAAACCTTCTGTGTTCGGAAAACAGCAATACCTGCTTTGGTAATTCCGAATGTAATACCGCAGATGAGTCTGGAATTTCCCCCAACCAACAAAACATTAACGGATGCAATCGTTGTCCGAATTCGGACAGCCATGGATCCGGGTCATTCATGGGTTTTCCGATACAGAGTGAAGAAAGAGTCAGACTAATGTTTGAGAGGGCGAAAGAGTATCTGCCCAGAAATGATTACCTCAAGAGGCTGCGTAGTGGAGACTTAGACTTGAGTGTTAGGAGAGAGGCTCTTGATTGGATTTCGAAGGCTCATGCCTATTATGGTTTTGGACCATTGAGCTTTTGTCTATCTATGAACTACTTGGATCGGTTCCTATCAATTTATGAATTACCTAGAGGTAAAACTTGGACCGTGCAATTGTTAGCTGTAGCTTGTTTGTCACTAGCAGCTAAAATGGAGGAGACTGAAGTACCTCTATTAGTAGATCTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAGCTACTAGTGTTAAGCACATTGAGATGGAGAATGCAAGCTTTAACTCCTTGTTCCTTCATAGACTACTTCCTCAGTAAAATCAGTAATGGGAAACAGCCAGCTAAGTCATCCCTTTCTAGATCAGTACAGCTCATAGTTGGCACAATTAGAGGTATTGACTTCTTGGACTTCATGCCTTCTGAAATTGCTGCAGCAGTGGCCATTTCTGTTACAAGGGAACTGCAAGCAATCGAAATTGATAAGGTCATCCCTTGTTTAATGATTGAGGAAAAGAGAGTTCTGAAGTGTCTTGAACTAATAAGAGATTTGTCCTTGATCAGTGTTTCTGCAAATTTGGGCAGAAATTTGATGCCATTGGCGCCCCAAAGCCCTGATGGGGTGCTGGATGTTGCTTGCTTGAGCTATAAAAGTGATGAATTAACTGTTGGATCATGTCAAAATTCTTCCCGCAACACTCCTAATGCTAAGAGGAGTAAATCAGATAGACCTTCTGATGGGTCTTTCAAGTCATGA 1077 0.4206 MADNLDDATSNLLCSENSNTCFGNSECNTADESGISPNQQNINGCNRCPNSDSHGSGSFMGFPIQSEERVRLMFERAKEYLPRNDYLKRLRSGDLDLSVRREALDWISKAHAYYGFGPLSFCLSMNYLDRFLSIYELPRGKTWTVQLLAVACLSLAAKMEETEVPLLVDLQVGEPKFVFEAKTIQRMELLVLSTLRWRMQALTPCSFIDYFLSKISNGKQPAKSSLSRSVQLIVGTIRGIDFLDFMPSEIAAAVAISVTRELQAIEIDKVIPCLMIEEKRVLKCLELIRDLSLISVSANLGRNLMPLAPQSPDGVLDVACLSYKSDELTVGSCQNSSRNTPNAKRSKSDRPSDGSFKS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1487 358 Gene3D - 73 285 - -
Dere09g1487 358 MobiDBLite consensus disorder prediction 330 358 - -
Dere09g1487 358 Pfam Cyclin, N-terminal domain 72 199 IPR006671 -
Dere09g1487 358 ProSitePatterns Cyclins signature. 100 131 IPR006671 -
Dere09g1487 358 Gene3D - 83 200 - -
Dere09g1487 358 Pfam Cyclin, C-terminal domain 203 292 IPR004367 -
Dere09g1487 358 CDD CYCLIN_AtCycD-like_rpt2 203 288 - -
Dere09g1487 358 CDD CYCLIN_AtCycD-like_rpt1 99 197 - -
Dere09g1487 358 FunFam D2/4-type cyclin 83 196 - -
Dere09g1487 358 PANTHER CYCLINS 71 289 IPR039361 -
Dere09g1487 358 MobiDBLite consensus disorder prediction 343 358 - -
Dere09g1487 358 SUPERFAMILY Cyclin-like 62 199 IPR036915 -
Dere09g1487 358 SMART cyclin_7 105 193 IPR013763 -
Dere09g1487 358 FunFam D6-type cyclin 197 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1487 Dere-ChrDere09 19051798 19053848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1487 60 268 Core Cell Cycle Gene Families AT5G65420 63.208 2.95e-94 280