Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1462 ATGGAATCATTAGATAAGCACAGAGGAGAGTTCTCTTGCGACGACGAGCCGTCGCCGAGAGGTGTATTGGAAATCCATATTTCGGGTGCAGAGTCTGACCACAGTGCGAGCAGCAGCTGCAGCTCTTGCTCGCCGGAGAAGTCATCGGCGGCCGAGAGACCGGTGGGGCGGGATGGGCACGGGCAGCAATGGAAGGCGATGATAGAATCATTTAGGAAGAAATCAGTGCAGAGAATTTCTACAATTCCATTGCTTGCTGCGAGCTACGAGATGTCAAGGAAGAGCTTGAGGAGGAGGAGGATAGGGCGGATTCGAAGTGCAGAAGATAGTATGCATCTGGCAGGTATTCCGACGAAGCCCTCTTGGAGGAACTTCGATTACGAAGAGCTAAAAGCTGCTACAGACAATTTCAGTCCTGAGAACCTGATTGGGCAAGGTGGACATGCTGAAGTCTACAAAGGACGCTTACCCGATGGTCAAGTTGTAGCAGTAAAGAGGCTAATGAAGAATGAAAAGGAAGATGAGGACAGAGCTGGTGATTTCCTGTCGGAGCTTGGAATTATTGGGCACATACACCACCCAAATGCTGTACGTCTGATTGGGTTCGGGGTCAATAATGGTCTCTACTTTGTCCTGCAATTAGCCCCACACGGCAGCCTTTCTTCTCTGCTTTTTGGTCCTGAATGCATGGAGTGGAAGATAAGGTTCAAGGTAGCTATTGGTGTGGCAAAGGGCTTGCAGTACCTCCATCATGATTGCCCAAGACGAATCATTCACAGAGACATTACGGCCTCTAACATATTACTAAACCACAACTACGAAGCTGAGATTTCAGATTTTGGACTCGCAAAGTGGCTTCCAGAGAAGTGGACTCACCATGTTGTCTCCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAATACTTTATGCATGGAATTGTGGACGAGAAGACTGATGTATTCGCGTTTGGGGTTTTGCTACTGGAGCTCATAACAGGTCGTCGTGCAGTTGATTCATGCAGCAGGCAAAGTCTTGTCCTCTGGGCAAAACCACTGCTAGATACTGACAATGTGAAGGACCTAGTAGACCCCAGATTGGGAGAAGCTTATGATTCTATTGAATTGAAGCGTACCATGGTCACTGCTTCCATGTGTCTCCACCACTCATCTTCCGACCGCCCATACATGAAACAGGTTGTGCAGCTCCTGAAGGGCGAAGAGGGACCTGTTGATATTAAGCAGAAATCAGTGTCAACAAGATCGCTCATGTTAGATGCCTGCGACCTCGAAGAGTATACTTGCTCTAATTACTTGAACGACCTCAATCGTCACATGCAACTAGCCATGGAGTGA 1356 0.483 MESLDKHRGEFSCDDEPSPRGVLEIHISGAESDHSASSSCSSCSPEKSSAAERPVGRDGHGQQWKAMIESFRKKSVQRISTIPLLAASYEMSRKSLRRRRIGRIRSAEDSMHLAGIPTKPSWRNFDYEELKAATDNFSPENLIGQGGHAEVYKGRLPDGQVVAVKRLMKNEKEDEDRAGDFLSELGIIGHIHHPNAVRLIGFGVNNGLYFVLQLAPHGSLSSLLFGPECMEWKIRFKVAIGVAKGLQYLHHDCPRRIIHRDITASNILLNHNYEAEISDFGLAKWLPEKWTHHVVSPIEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLELITGRRAVDSCSRQSLVLWAKPLLDTDNVKDLVDPRLGEAYDSIELKRTMVTASMCLHHSSSDRPYMKQVVQLLKGEEGPVDIKQKSVSTRSLMLDACDLEEYTCSNYLNDLNRHMQLAME 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1462 451 Gene3D Phosphorylase Kinase; domain 1 110 212 - -
Dere09g1462 451 MobiDBLite consensus disorder prediction 1 61 - -
Dere09g1462 451 MobiDBLite consensus disorder prediction 1 21 - -
Dere09g1462 451 ProSitePatterns Tyrosine protein kinases specific active-site signature. 257 269 IPR008266 GO:0004672|GO:0006468
Dere09g1462 451 PANTHER OS08G0249100 PROTEIN 13 420 IPR046958 -
Dere09g1462 451 MobiDBLite consensus disorder prediction 31 48 - -
Dere09g1462 451 Gene3D Transferase(Phosphotransferase) domain 1 216 422 - -
Dere09g1462 451 ProSiteProfiles Protein kinase domain profile. 137 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1462 451 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 216 418 - -
Dere09g1462 451 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 112 214 - -
Dere09g1462 451 Pfam Protein tyrosine and serine/threonine kinase 141 404 IPR001245 GO:0004672|GO:0006468
Dere09g1462 451 SUPERFAMILY Protein kinase-like (PK-like) 118 404 IPR011009 -
Dere09g1462 451 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1462 Dere-ChrDere09 18768140 18772161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1462 103 427 Trihelix Transcription Factor Family AT5G38560 41.176 1.05e-71 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Dere09g1462 PK_Tyr_Ser-Thr 2.8e-40 CL0016