Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1456 ATGGCTCGTGCAATAAAACCTCCTTTAAACGACGTCATACTTCGCTTTGTGTTGGATGCAAGGAGCAATCTTGTTGTGGAACTTTCTAGTTGGATTGGTGATCAACTGAGGCCTGTCACTCTTCCAGTACTGCCTCATGGAAATCTATCAGAGAAAACTTTCAAGTCATGGAGGCCAAATAGATCTTTACCTGTTGAGGCAAAAAATACTCCTTCTGGTGGTTCATCAATGCAAAATAACCAACCGCTGAAGGTTCCTAATTTTATCGGGGGGAGATATGTAGATTCTCAAAGTAGTGGAATTCTTGATGTTACAAATCCTGCAACACAAGAAGTTGTGTCTCAAGTTCCTTTAACTACATATGAAGAGTTCAAAGCTGCAGTTAGAGCAGCGAAGCAAACTTTTCCTTCATGGAAAAACACTCCAATCATCACTCGTCAGCGTGTTATGTTTAAGCTCCAGGAGCTTATCTACAGAGACATTGATAAGCTTGCCATGAATATCGGCATAGAGCAGGGTAAGACATTAAAAGGTGCCCGAGAAGATGTGCTTCATGGTTTAGAGGTGGTGGAGCATGCTTGTGGGATGGCAAATCTGCAAATGGGGGAATTTGTCCCTAATGCCTGTGATGGAATTGATACATACTGCATCAGAGAGCCCCTTGGAGTTTGTGCTGGAATATGCCCCTTCAATGTTCCAGCAATGATAGCCTTGTGGATGTTCCCTATTGCTGTAGCATGTGGCAACACATTTATTCTCAAGCCATGTGAGAAGAATCCAGGGGCTTCAATGATACTTGCAGCACTAGCAATGGAAGCGGGTTTACCAGATGGTGTATTAAATATTGTTCACGGTACCCATGAGATTGTTAATTACATATGTGATGATGAGGATATAAAAGCTGTATCATTTGCAGGTCCAGTTGCGGCTGGAATGCACATATATGCCAGGGCTGCTGCTAGTGGGAAACGTGTCCAGTCCAATACAGGTGGCAAAAATCATGCAATTGTCATGCCAGACGCTAGCATGGATGCTACACTAGATGCTCTTATTGCTGCATCCTTTGGTGCAGCAGGAGAGAGGTGCATGGCTCTAACCACAGCTGTTTTTGTTGGAGGATCTATGCCATGGGAAGAAGAACTTGTGCAGCGTGCCAAAGTACTTAAAGTGAATGCAGGAACAGATCCAAGTGCCGATCTTGGTCCGGTTATTAGCAAAGAGGCAAAGGATCGGATATGTAGATTAGTTCAGAGCAGTGTTGACAATGGTGCAAGGCTCCTACTTGATGGAAGACATATTGTGGTACCAGGATATGAGAATGGAAACTTTGTTGCTCCTACTATTTTATGTGATGTTACAACCAACATGGAGTGCTACAAGGAAGAAATTTTTGGACCTGTTCTGCTCTGCATGCAGGCTGATAACCTAGATGAAGCAATATCGATAATCAACAAAAACAAGTATGGGAATGGAGCTACCATATTCACCACCTCTGGTATAGCTGCTAGGAAGTTCCAGAATGAGGTTGAAGCTGGTCTGGTTGGGATCAATGTTACTGTTCCTGTTCCCATGGCATTTTCCTCCTTCAATGGGTCTAAGGCATCTTTCGCTGGTGATCTAAATTTTAATGGAAAGGAAGGAGTCCAGTTTTATACCCAAATCAAAACAGTGGCACAAAAGTGGAAGGAGCTCCCTCGGCTAGGTGTTTTGCCTTCTGCATGTCCATCTGAGACAGATCGAACCAATCGACATGCCTCTTTATCAGTGCCTTCATCTGACAGACATCCACCTAGAGAAAGAGCACCAGAAATTATACCTTTAGAATCTGAGAGTGATTCACCAGCGCAAGGGATACAAATGGCCATCAGAGATGCTAATATTGAGATTACAGCCATGTCATCGGCTTCTCCGACAACTGATAAGGGTCTTGGAAGACAGGGCATGTCCCTGGTCCTACCTTCAACATCTGAGAGAGACATGGCAGATCAGGACATGCCACAGGTATTATCACCTGCATCTGAGAAGGATATAACAAGCCAAGGAATGTCTGTAGCCACACCCCAGACATCAGAGAAGTTGTACTTTTCTAAAACATCACAGTGGATTGAAAGTTCGTCTGCAACATCTCAAAGGATTGAAACTATCCCACCAACTTCTGAGAGGGGTCATGTGCCTACTTCTCAGAGGAATGACAATATATCTCCAGCATCTCAAAAATCTAATACCGCCACAGCTTTGGAATCAGAGAGGGCATACATGCCTATGTCCCATAAAGTTGATAGCACTGGTCCATCCCAAAGGATCGATGCTACTCGGCATTCTACTTCTGAACGGGTGTATGCACTAGCAGCATCTCATTTAACTCAGAACCTTGCTCGAACATTTGAAAGACCTGAACCCATGTTTCCAACTTCTGAGAGGGTATATATGCCTGCCACATCTCAAAGGAAAGACCTTATTGGCTCAGGATCTCACAAGACTGATATTGGCTTGGGTCCAACTTCGGAGAGGATATATATCTCTGCAGCATCTCATAGAACTGAAAGTATTAACGCACCTTCCCAGCTTGGTGATGCTTTGCCTCCAACTTCTGAGAGGGCATTCATGCCTCCAATGGTACAGAATATGCCAACTAGTTCAGAGAGGTTATATATACCAGCTACTTCTCAAAGGATGTATAATCGAAACCCAATAATATCAATGGATGAATTTCCCAGCCAAGTCAAGGCCTTGAGTGCTTTAGCAATCGGGAGGGCCTTGCCGCGGGCTGATTGCATCGAAAGGAAGAGAGCGAAAATGCAATGCAGTTATCCTCAGTGGGTTTCCATTTTCTATCCTCCAACATTCAGAACACCATCTTTTCAATCGAGGTTTTCAGTTGCTCGACCACAGACACGCACAGAAGGAAGTTCCGATTACAACGAAGTCGCTAACGGTGACAATTTTGGTTCTGACGATGACATTCTTCATGCAATTTCTGGTGCAAAATCGAAATTGATTACTAGTGCTTCAAACCCATTTGTGAAGCACTGCCTCAAGCTCCGTAACGACTCTTCTTATCGCCGTTCTCATGGTTCAGTTCTTGTTGTGGGTTCTACTCCTATAAGAGAAATATACAGGTTTCAAGAGTCATCGCAAGATAAAAATATTAAAATGGATTGTTTAATTTTGCCTGATAAAGCTGAGATTCCCAAAGGGCTGGATAAATCCCCTGGTTCTATTGTGCGTGTGAGTTCTATGGTGATGAAAAAGCTTGCACGGCTGCAGTCAACTGATTCTATTGATGCAATTGCCCTGATGAATATCCCTACCAGTTTCTTCAGTCTAGATGGCAATCAAGGGACAGCAGACTGTCAGAGGTGGTTTCAATCTCCTCATCGAATTTTAGTCCTTGAGAGGATTCAGGATCCTGGTAACCTTGGTACACTACTCAGATCAGCAGTGGCCTTTGGCTGGGACGGAGTTTTTCTTCTTCCTGGCTGTTGTGATCCATTCAATGATAAAGCTCTTCGAGCTAGCCGAGGTGCCTCCTTTCAGCTACCTCTAGTTTCTGGCGGTTGGGTTCATCTGGAGTCCCTCAGAAAAACATTCCAAATGAAGTTGCTCGCTGGCCATCCAGATCATGAAGGGTTAGCCAAGCCAGTTTGTCGGATTTCTCCAAGCTTCTGTGATTCTGTATCAGATAGGCCTCTGTGCTTGGTTTTAGGCAGTGAAGGAAGTGGTCTTTCCGAAACATCCCTACAAGCATGTGAGCTTGTCAGCATTCCAATGGCCGGTGAATTTGAATCTCTCAATGTTTCAGTTGCTGGTGGGATTTTCCTGTATATGCTACAGCCACAGAGTAGATGA 3849 0.4417 MARAIKPPLNDVILRFVLDARSNLVVELSSWIGDQLRPVTLPVLPHGNLSEKTFKSWRPNRSLPVEAKNTPSGGSSMQNNQPLKVPNFIGGRYVDSQSSGILDVTNPATQEVVSQVPLTTYEEFKAAVRAAKQTFPSWKNTPIITRQRVMFKLQELIYRDIDKLAMNIGIEQGKTLKGAREDVLHGLEVVEHACGMANLQMGEFVPNACDGIDTYCIREPLGVCAGICPFNVPAMIALWMFPIAVACGNTFILKPCEKNPGASMILAALAMEAGLPDGVLNIVHGTHEIVNYICDDEDIKAVSFAGPVAAGMHIYARAAASGKRVQSNTGGKNHAIVMPDASMDATLDALIAASFGAAGERCMALTTAVFVGGSMPWEEELVQRAKVLKVNAGTDPSADLGPVISKEAKDRICRLVQSSVDNGARLLLDGRHIVVPGYENGNFVAPTILCDVTTNMECYKEEIFGPVLLCMQADNLDEAISIINKNKYGNGATIFTTSGIAARKFQNEVEAGLVGINVTVPVPMAFSSFNGSKASFAGDLNFNGKEGVQFYTQIKTVAQKWKELPRLGVLPSACPSETDRTNRHASLSVPSSDRHPPRERAPEIIPLESESDSPAQGIQMAIRDANIEITAMSSASPTTDKGLGRQGMSLVLPSTSERDMADQDMPQVLSPASEKDITSQGMSVATPQTSEKLYFSKTSQWIESSSATSQRIETIPPTSERGHVPTSQRNDNISPASQKSNTATALESERAYMPMSHKVDSTGPSQRIDATRHSTSERVYALAASHLTQNLARTFERPEPMFPTSERVYMPATSQRKDLIGSGSHKTDIGLGPTSERIYISAASHRTESINAPSQLGDALPPTSERAFMPPMVQNMPTSSERLYIPATSQRMYNRNPIISMDEFPSQVKALSALAIGRALPRADCIERKRAKMQCSYPQWVSIFYPPTFRTPSFQSRFSVARPQTRTEGSSDYNEVANGDNFGSDDDILHAISGAKSKLITSASNPFVKHCLKLRNDSSYRRSHGSVLVVGSTPIREIYRFQESSQDKNIKMDCLILPDKAEIPKGLDKSPGSIVRVSSMVMKKLARLQSTDSIDAIALMNIPTSFFSLDGNQGTADCQRWFQSPHRILVLERIQDPGNLGTLLRSAVAFGWDGVFLLPGCCDPFNDKALRASRGASFQLPLVSGGWVHLESLRKTFQMKLLAGHPDHEGLAKPVCRISPSFCDSVSDRPLCLVLGSEGSGLSETSLQACELVSIPMAGEFESLNVSVAGGIFLYMLQPQSR 1282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1456 1282 CDD ALDH_F6_MMSDH 85 561 IPR010061 GO:0004491
Dere09g1456 1282 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 46 679 IPR010061 GO:0004491
Dere09g1456 1282 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 330 530 IPR016163 GO:0016620
Dere09g1456 1282 SUPERFAMILY alpha/beta knot 1123 1280 IPR029028 -
Dere09g1456 1282 MobiDBLite consensus disorder prediction 575 589 - -
Dere09g1456 1282 Pfam Aldehyde dehydrogenase family 93 557 IPR015590 GO:0016491
Dere09g1456 1282 FunFam Putative tRNA/rRNA methyltransferase YsgA 1116 1282 - -
Dere09g1456 1282 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 355 366 IPR016160 GO:0016491
Dere09g1456 1282 MobiDBLite consensus disorder prediction 572 614 - -
Dere09g1456 1282 Pfam SpoU rRNA Methylase family 1128 1275 IPR001537 GO:0003723|GO:0006396|GO:0008173
Dere09g1456 1282 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 330 530 - -
Dere09g1456 1282 Gene3D - 1116 1282 IPR029026 -
Dere09g1456 1282 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 89 337 - -
Dere09g1456 1282 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 86 561 IPR010061 GO:0004491
Dere09g1456 1282 MobiDBLite consensus disorder prediction 61 81 - -
Dere09g1456 1282 SUPERFAMILY ALDH-like 79 563 IPR016161 GO:0016491
Dere09g1456 1282 CDD SpoU-like_rRNA-MTase 1127 1277 - -
Dere09g1456 1282 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 104 538 IPR016162 GO:0016491
Dere09g1456 1282 Gene3D - 999 1103 IPR029064 -
Dere09g1456 1282 SUPERFAMILY L30e-like 999 1097 IPR029064 -
Dere09g1456 1282 MobiDBLite consensus disorder prediction 705 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1456 Dere-ChrDere09 18653352 18671043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1456 76 545 Aldehyde Dehydrogenase Gene Family AT2G14170 73.830 0.0 722