LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere09g1449	ATGGCAGTACAACCTGAGTTTGAGCATCCAAGGAAGGCATTCGGATGGGCAGCTAGGGATCCATCTGGGGTTCTCTCCCCTTTCATATTCTCTCGAAGGCACGAGATTGTTGGCATAGTGACAGAGGTGGGAAGCAAAGTAAACAAGTTCAAAGTTGGAGACAAGGTTGGTGTGGGATGCTTGGTCGGGTCCTGCCGCTCCTGTCAAAGCTGTTCCGATGACCTTGAGATCCAATGCTCAAAATATATTCTTACATATGGGGCCGAGTACGTTGACGGCACTATCACATATGGAGGCTACTCTGATGCTATGGTTGCGGACGAGCACTTTGTGGTCCGCATTCCCGATGCTTTACCTCTTGATGCTGCAGCTCCTCTGCTTTGTGCTGGGATCACAGTGTATAGCCCTCTCAGATATTTTGGTCTCGACAAGCCTGGTCTTCATGTTGGTGTGGTTGGTCTTGGTGGCCTTGGCCATATGGCTGTCAAATTTGCCAAAGCTCTTGGGGCTAAGGTCACAGTCATTAGTACTTCTCCGAGCAAGAAGAAGGAAGCCATTGAACATCTAGGAGCTGACTCTTTTATCGTCAGCCGTGAGCAGGATCTGATGCAGGCTGCAATGGGCACGTTAGATGGCATAATTGACACAGTTTCTGCCGTGCATCCTCTCTTGCCTTTGATTGGTCTATTGAAGTCTAATGGAAAACTTGTATTGGTTGGTGCACCTGAAAAGCCTCTGGAGCTGCCGGTCTTCCCTTTACTTTTGGAACACAACGTGAAACCTGACATAGAAGTAATTCCTATGGAATATGTGAATACTGCAATGGAGCGCCTCCTCAAAGGTGGTAAAGAAAAGAGTCCAGCTGCTATGGGGACCTTGGATGGCATCATTGACACAGTTTCTGCGATGCATCCTCTCTTGCCATTGATTCATCTATTGAAGTCTAATGGAAAACTTGTATTGGTTGGTGCACCCGAAAAGCCTCTGGAGTTGCCGGTCTTCCCTCTACTTATGGGGAGAAAGATAGTGGCTGGGAGTGGCATCGGAGGGATGAAGGAGACACAAGAAATGGTTGATTTTGCTGCAGCACACAACGTGAAACCCGATATAGAAGTGATTCCTATGGATTACGTGAACACTGCAATGGAGCGCCTCCTAAAAGCTGATGTCAAATATCGTTTTGTGATTGACATTGGGAACACATTGAAGCCAACCTCTTAG	1221	0.4758	MAVQPEFEHPRKAFGWAARDPSGVLSPFIFSRRHEIVGIVTEVGSKVNKFKVGDKVGVGCLVGSCRSCQSCSDDLEIQCSKYILTYGAEYVDGTITYGGYSDAMVADEHFVVRIPDALPLDAAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKALGAKVTVISTSPSKKKEAIEHLGADSFIVSREQDLMQAAMGTLDGIIDTVSAVHPLLPLIGLLKSNGKLVLVGAPEKPLELPVFPLLLEHNVKPDIEVIPMEYVNTAMERLLKGGKEKSPAAMGTLDGIIDTVSAMHPLLPLIHLLKSNGKLVLVGAPEKPLELPVFPLLMGRKIVAGSGIGGMKETQEMVDFAAAHNVKPDIEVIPMDYVNTAMERLLKADVKYRFVIDIGNTLKPTS	406

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere09g1449	406	Pfam	Zinc-binding dehydrogenase	156	256	IPR013149	-
	Dere09g1449	406	SUPERFAMILY	GroES-like	34	146	IPR011032	-
	Dere09g1449	406	FunFam	Cinnamyl alcohol dehydrogenase	129	260	-	-
	Dere09g1449	406	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	118	269	IPR036291	-
	Dere09g1449	406	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	290	367	IPR036291	-
	Dere09g1449	406	Gene3D	-	13	133	-	-
	Dere09g1449	406	FunFam	Putative cinnamyl alcohol dehydrogenase 6	369	398	-	-
	Dere09g1449	406	PANTHER	ALDEHYDE REDUCTASE	34	281	IPR047109	GO:0016616
	Dere09g1449	406	Gene3D	-	269	368	-	-
	Dere09g1449	406	Gene3D	-	134	261	-	-
	Dere09g1449	406	FunFam	Putative cinnamyl alcohol dehydrogenase 6	287	368	-	-
	Dere09g1449	406	Pfam	Alcohol dehydrogenase GroES-like domain	34	113	IPR013154	-
	Dere09g1449	406	CDD	CAD1	14	397	IPR047109	GO:0016616

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere09g1449	Dere-ChrDere09	18552028	18557149	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere09g1449	289	405	Monolignol Biosynthesis Gene Families	AT4G37990	73.504	4.40e-47	163