Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1445 ATGCCAGTCTCGCCGGATTGGGATAAAATATTTTTATATCTACCTCATCTTTTTTCCCATAACTGTAAACACACTCTACGCTCTGCATCATTTCTCTTCAGTCTCAACTTTCGTTTGATTGTGAGTGAAGTAGAAGAGATTCAAATGGCGGTGCAACGAGAGGTTGAGCATCCCAAAAAGGCTTTTGGATGGGCAGCCAGGGATTCATCTGGCCTTCTCTCTCCTTTCAATTTCTCTCGAAGGGAAACAGGAGAGAATGATGTGGCATTCAAAGTGTTGTACTGTGGAATATGTCATTCGGACCTCCACATGGTGAAGAACGAATGGGGCATTTCTGCCTATCCACTTGTTCCTGGGCACGAGATTGTTGGTATTGTGACAGAGGTGGGAAGCAAAGTACAAAAATTCAAAGTCGGAGACAAGGTTGGTGTGGGATGCATGGTTGGGTCCTGCCGCTCTTGTCAAAGCTGTTCAGATAATCTTGAGAACTATTGCCCAGAAATGATCCTCACATACGGTGCCCAGTATGTTGATGGCTCCGCTACATATGGAGGCTACTCCGACTTAATGGTTGCAGATGAGCACTTTGTGATCAGAATCCCAGATTCTTTACCTCTTGATGCTGCAGCTCCTCTACTTTGTGCTGGGATCACAGTGTATAGCCCTCTCAGATATTATGGTCTTGACAAGCCTGGCCTTCACATCGGTGTGGTTGGTCTTGGTGGGCTCGGCCATCTGGCTGTCAAATTTGCTAAAGCTTTTGGGGCTAAGGTCACAGTAATCAGTACATCTCCTAATAAAAAGAAGGAAGCCATTGAACATCTAGGAGCTGACTCCTTTGTGATCAGCCGTGAGCGAAGTCAGATGAAGGCTGCAGTAGGCACTTTGGATGGAATCATTGACACAGTTTTTGCAGTCCATCCTCTCATGCCGTTGATTGGTTTGTTGAAGTGTCATGGGAAACTTGTAATGGTTGGTGCACCAGAAAAGCCTCTGGAGCTGCCAGTCTTCCCTTTAATTATGGGGAGAAAGTTAATAGCTGGAAGTTGCATTGGAGGGATGAAGGAGACACAAGAAATGATTGATTTTGCTTCTGAACACAAGATAAAACCTGACATCGAGGTTATTCCTATAGATTACGTGAACACTGCACTGGAGCGCCTTGTCAAAGCAGATGTCAAATATCGATTTGTGATTGACATTGGGAACACACTGAAGCCAAGCCTTTAG 1230 0.4512 MPVSPDWDKIFLYLPHLFSHNCKHTLRSASFLFSLNFRLIVSEVEEIQMAVQREVEHPKKAFGWAARDSSGLLSPFNFSRRETGENDVAFKVLYCGICHSDLHMVKNEWGISAYPLVPGHEIVGIVTEVGSKVQKFKVGDKVGVGCMVGSCRSCQSCSDNLENYCPEMILTYGAQYVDGSATYGGYSDLMVADEHFVIRIPDSLPLDAAAPLLCAGITVYSPLRYYGLDKPGLHIGVVGLGGLGHLAVKFAKAFGAKVTVISTSPNKKKEAIEHLGADSFVISRERSQMKAAVGTLDGIIDTVFAVHPLMPLIGLLKCHGKLVMVGAPEKPLELPVFPLIMGRKLIAGSCIGGMKETQEMIDFASEHKIKPDIEVIPIDYVNTALERLVKADVKYRFVIDIGNTLKPSL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1445 409 FunFam Uncharacterized protein 64 214 - -
Dere09g1445 409 Pfam Zinc-binding dehydrogenase 242 364 IPR013149 -
Dere09g1445 409 CDD CAD1 62 400 IPR047109 GO:0016616
Dere09g1445 409 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 119 133 IPR002328 GO:0008270|GO:0016491
Dere09g1445 409 Gene3D - 64 401 - -
Dere09g1445 409 SUPERFAMILY GroES-like 68 232 IPR011032 -
Dere09g1445 409 FunFam Cinnamyl alcohol dehydrogenase 215 371 - -
Dere09g1445 409 SMART PKS_ER_names_mod 71 399 IPR020843 GO:0016491
Dere09g1445 409 PANTHER ALDEHYDE REDUCTASE 54 404 IPR047109 GO:0016616
Dere09g1445 409 FunFam Putative cinnamyl alcohol dehydrogenase 6 372 401 - -
Dere09g1445 409 Pfam Alcohol dehydrogenase GroES-like domain 86 199 IPR013154 -
Dere09g1445 409 Gene3D - 215 371 - -
Dere09g1445 409 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 204 370 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1445 Dere-ChrDere09 18502815 18505166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1445 59 408 Monolignol Biosynthesis Gene Families AT4G37990 73.429 1.61e-178 499