Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1429 ATGCCAGCATTGAACACTGCTTCAGACTCAACTCTCATTTCAACTTTCGAAGTCAAACTCATATTTTCAAGAGTCTCCTGTCCCCTGACCACATCCAAAGAAGGCTCGTCTGGAAATTGGCTTGAAATTCTTTTGGAGGAAACTACAGAAATCCTTGAGATAATGATGGAGGAGTTGGATAACTGCATATTAAGACTTGTTAAAGTTTATATCTTTTTCCTTCTTCTGTTTATCAGATCAGCTTCTGCAAGTGAAGATTTTGTGAGCATAGCGTGCTGTGCTGATTCAGATTATACAGATCCAAAGACTTATGTAAATTACACATCAGATTTTAGTTCCTTCCCAGATAGAACAAGCTGCCGAGACATAACCAAACCTGTGGTAAACCATGCAGGCAATGAAAAAGCTAGATTGCTTGATATAGATAAAGGAAAAAGATGTTACAACTTGCCAACAGTTAAGGATCAAGTGTATCTGTTAAGGGGCACATTTCCATCTGATGAGTCCTTGAGTCAATCTCCGCATTCCTCCTTCGATGTTACAATTGGGGTTACCACAATAGGTGTAGTAGAGAAACCATCCCAGGAATTGGAAATTGAGGGAATTTTCAGGGCTACTAAGAACTACATAGACTTCTGCTTAGTGAAGGACGAGGGAAGTCCCTATATTTCACAGATTGAATTGAGGCCATTGTGGGGAGAGTACCTACAGGATTCCCCTTCTAGTGTCCTAAAACTGATCAGAAGAAATAACTTAGGGGGCACCGAAGATGACATCAGGTACCCACTTGACCAAAGTGACAGAATCTGGAAAGCTACTTCAAGTCCATCATCTACTTCCATATCATTTAATGTGAACATTTCCGGCCACAATGCTAACTCGACACCTCCTCTACAAGTCTTACAAAACGCTCTTACGCATCCTGAGCGATTGGAATTCATTCACGATGGCCCCGAAACCGGGAATTCCGAGTACCGTTTGTTTCTCTATTTTCTAGAATTGAATGCGAGTCTCGGACTAGGCAAAAGGGTGTTTGACATCTACGTCAACGGCGAGATTAAAGAGCCGAAGTTCGACATATTTGCTGGTGGATCGAACTACAGACACACTGTTTTGAACTTTTCGGAAAATGGGTCGCTGAATCTAACCTTGACCAAAGCCTCAGGGTCTGAGCATGGACCCCTTTGTAATGCATTCGAGATCCTGCAGGTTCTCCCTTTGATGCAAGAGACCAACCAAACAGACACGGAAGTAATCCTGAAGGTGAGAGAACAATTGTTAGAGAATAACCGAGGCAATAAAGAGCTGGAGAGTTGGACTGGGGACCCATGCATTCTTTTTCCCTGGCTGCATGTAGGATGTAAAAGTTTAGGCGGTCTACTTGCTGTCATTGAACTGGATCTTTCCTCAAGTAATCTCCAAGGGCCGATTCCTTCCAGTATCACTGAATTGGCTAACTTACAAATATTGAACCTGAGCTACAATGGCTTTACTGGGAATATCCCCTCATTTCCACCTTCATCTTCGCTTGTATCAGTAGACCTGAGCCACAATGATCTTAATGGATCACTTCCATGGACAATTTCCTCACTGCCACAGCTAAAGTCCTTGTATTTTGGCTGCAATAGGCGAATGAGTAAAGAGGTTCCAGCTACCTTGAACAGTTCGCTGAATACAGATAATGGAAGGTGCAAACCTGGAAACCCAGGAATTTCAGAAAAACAAATCGTCATTGGCACTGTTACATGTGGATCAGTCTTGATTATTTTGGCTATTGGCATTCTTTTTGGTTGGCGTTATAGAGAAAAATTAATTCCCTGGGGAACATCTGATGTAAAGGCATACCCAACAGCAACAAATTTAATTTTCTCTTTACCCAGCAAAGATGATTTCTTCACGAAGTCAGTATCCGTTCAAACATACACTCTGGAATACATAGAGGCAGCCACCGATAAGTACAAGACTTTGATAGGTGAAGGTGGGTTTGGCTCTGTTTACCGTGGCACTCTAGAAGATGGTCAAGAAGTGGCAGTGAAGGTCCGTTCAGCCACATCAACTCAGGGAACTCGCGAATTTGACAATGAGGTAAACCTGCTTTCTACTATACGGCATGAGAACCTGGTGCCTCTTCTTGGTTATTGTTGTGAAAAAGATCAACAAATTCTCGTGTATCCTTTTATGTCCAATGGCTCTTTACAAGATAGGCTTTATGGGGAACCAGCCAAGAGAAAAGTATTAGACTGGCCAACCAGGCTATCTAGTGCTCTGGGTGCAGCTCGAGGTTTGTCATATCTTCACACATTTTCAGGACGCTCTGTTGTACACAGAGATGTAAAATCAAGCAATATACTTCTGGATCACAGCATGTGTGCTAAGGTAGCAGACTTTGGTTTCTCAAAATATGCTCCTCAGGAAGGAGACAGCGGTGCTTCTCTTGAAGTAAGAGGAACCGCAGGATACATGGATCCTGAGTACTACACAACCCAGCAATTATCCGCGAAGAGTGATGTCTTTAGCTTTGGTGTGGTTCTACTTGAAATTGTGAGCGGTCGGGAACCTCTCAACATACATAGACCACGGAATGAGTGGAGCTTGGTTGAATGGGCAAAACCATACATAAGGCAGTCAAAGATCGACGAAATTGTGGATCCTGGCATCAGGGGAGGATATCATGCAGAGGCTATGTGGAGAGTGTTAGAAATATCACTGTCATGCATTGAACCATTCTCAGCACATCGACCAAGCATGGCCGACATTGTCCGTGAGTTGGAGGATGCTCTGATTATAGAAAACAATGCATCAGAATACATGAAGTCCATAGAAAGCCTTGGAGGATCCAACCGCTACTCCATTGTCATAGAGAAAAGGGCGGTACCCCCAACTCCATCTACAACAGAGTCAACCATATCCACCAAAACCTTGTCCCACCCACAGCCGAGATAG 2943 0.4332 MPALNTASDSTLISTFEVKLIFSRVSCPLTTSKEGSSGNWLEILLEETTEILEIMMEELDNCILRLVKVYIFFLLLFIRSASASEDFVSIACCADSDYTDPKTYVNYTSDFSSFPDRTSCRDITKPVVNHAGNEKARLLDIDKGKRCYNLPTVKDQVYLLRGTFPSDESLSQSPHSSFDVTIGVTTIGVVEKPSQELEIEGIFRATKNYIDFCLVKDEGSPYISQIELRPLWGEYLQDSPSSVLKLIRRNNLGGTEDDIRYPLDQSDRIWKATSSPSSTSISFNVNISGHNANSTPPLQVLQNALTHPERLEFIHDGPETGNSEYRLFLYFLELNASLGLGKRVFDIYVNGEIKEPKFDIFAGGSNYRHTVLNFSENGSLNLTLTKASGSEHGPLCNAFEILQVLPLMQETNQTDTEVILKVREQLLENNRGNKELESWTGDPCILFPWLHVGCKSLGGLLAVIELDLSSSNLQGPIPSSITELANLQILNLSYNGFTGNIPSFPPSSSLVSVDLSHNDLNGSLPWTISSLPQLKSLYFGCNRRMSKEVPATLNSSLNTDNGRCKPGNPGISEKQIVIGTVTCGSVLIILAIGILFGWRYREKLIPWGTSDVKAYPTATNLIFSLPSKDDFFTKSVSVQTYTLEYIEAATDKYKTLIGEGGFGSVYRGTLEDGQEVAVKVRSATSTQGTREFDNEVNLLSTIRHENLVPLLGYCCEKDQQILVYPFMSNGSLQDRLYGEPAKRKVLDWPTRLSSALGAARGLSYLHTFSGRSVVHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSGASLEVRGTAGYMDPEYYTTQQLSAKSDVFSFGVVLLEIVSGREPLNIHRPRNEWSLVEWAKPYIRQSKIDEIVDPGIRGGYHAEAMWRVLEISLSCIEPFSAHRPSMADIVRELEDALIIENNASEYMKSIESLGGSNRYSIVIEKRAVPPTPSTTESTISTKTLSHPQPR 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1429 980 CDD STKc_IRAK 657 924 - -
Dere09g1429 980 Gene3D Ribonuclease Inhibitor 411 561 IPR032675 -
Dere09g1429 980 SUPERFAMILY L domain-like 436 553 - -
Dere09g1429 980 FunFam Nodulation receptor kinase 619 726 - -
Dere09g1429 980 Pfam Malectin-like domain 95 404 IPR024788 -
Dere09g1429 980 MobiDBLite consensus disorder prediction 960 980 - -
Dere09g1429 980 Gene3D Phosphorylase Kinase; domain 1 624 726 - -
Dere09g1429 980 Gene3D - 245 404 - -
Dere09g1429 980 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 727 936 - -
Dere09g1429 980 SUPERFAMILY Protein kinase-like (PK-like) 631 923 IPR011009 -
Dere09g1429 980 MobiDBLite consensus disorder prediction 959 980 - -
Dere09g1429 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 773 785 IPR008271 GO:0004672|GO:0006468
Dere09g1429 980 Gene3D Transferase(Phosphotransferase) domain 1 727 943 - -
Dere09g1429 980 Pfam Protein tyrosine and serine/threonine kinase 654 923 IPR001245 GO:0004672|GO:0006468
Dere09g1429 980 SMART serkin_6 651 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1429 980 ProSiteProfiles Protein kinase domain profile. 651 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1429 980 ProSitePatterns Protein kinases ATP-binding region signature. 657 679 IPR017441 GO:0005524
Dere09g1429 980 PANTHER OS07G0107800 PROTEIN-RELATED 88 927 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1429 Dere-ChrDere09 18332187 18341399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1429 56 962 Receptor kinase-like Gene Family AT2G04300 32.546 1.66e-121 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere09g1429 Malectin_like 6.4e-48 CL0202