Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1409 ATGTATGATATAGGCAAGAGGAGTTTGTTGATGGCTTCACATTTCTGTCAAATGAGATGGAATGGAAGTCTTGGATGTGTTAATATTTCAATTGTCGAACCCATTTCTGAGCTTCATCTGAAGCCTCTAACCAGGTTATCCCTGGGAATAAATAACCATAAGTCTCTTGCAAAAGCGTCGGACATTCAATTTTCTTTGCTTTTCCATCAAGTTCTTTGGGAGCTAGCCAAAGCTTGTGTATGTGATGTTTTGCCTATCGATCGCCAAACAATTATCAAATTTTCCCTTATGAAGGAAATTCCAATTTTGCAGATGGGCGATGTGGCTAAAGACCTTACTGCTGGAACAGTAGGAGGAGCAGCACAATTGATATGTGGACACCCTTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACCGCTTCCTGGCAAGCCTCTCAAATACTCTGGTGCCATTGATGCTGTTAAGAAGACAATAGCAGCTGAAGGCCCCAGAGGCTTATACAAAGGAATGGGTGCACCACTTGCCACAGTAGCAGCCTTTAATGCTGTCCTGTTCTCAGCCAGGGGACAAATGGAGGCCTTACTGAGGTCCCACCCCGGTGCCCCCCTCACTGTAAAACAGCAGGTTGTTTGTGGAGCTGGTGCTGGAGTTGTAGTTTCCATTCTAGCTTGCCCCACTGAACTCATCAAATGCAGGTTGCAAGCACAGAGTGTTGTTGCAGGTTCTGGAACAGCTACTGTGGCTGTCAAGTATGGAGGACCCATTGATGTGGCTAGGCAAGTTTTGAGATCAGAAGGAGGAATGAAAGGTCTGTTCAAGGGCATGGTTCCCACAATGGCACGTGAAGTACCTGGAAATGCCATTATGTTTGGTGTATATGAAGCAACAAAGCAGTTACTAGCAGGGGGTTCTGATACATCTGGGTTAGGTAGAGGCTCCTTGATTGTTGCTGGAGGCTTGGCTGGAGCTTCAGTGTGGTTAGCCGTTTACCCAACTGATGTGGTTAAGAGTGTGATTCAAGTGGATGATTACAGAAACCCAAAGTTTTCTGGTGCCCTTGATGCTTTCAGAAAGATTCAAGCTTCAGAAGGGTTCAAAGGCCTGTACAAGGGTTTTGGTCCTGCAATAGCCCGGAGTGTTCCAGCAAATGCAGCTTGCTTCTTGGCTTATGAGATGACTAGATCAGCACTGGTTACAGCCTTTATCCCTCGTTCAGCGTTGGATATTCATCAAATTCGTTTGCTTTTCGGTCAGAACAAAATTAATACAGTGCAGTACAGTGGATTACGTTTTCGTAAATTCAATATCTATATTGCTGGAAGTGTATGTGATAGAATGGCTATCACTAAGCTGTGGTTTTGGGACGTATCTAGCAGCCTCGAACTATGGTTGAGCTTATCCCATATTCTGATGGGAGATGTGGCTAAGGACTTTATGGCTGGGACAGTAGGAGGAGTAGCACAATTGATATGTGGACACCCTTTTGACACCATCAAGGTCAAGCTCCAAAGCCAGCCTACACAGCTCCATGGCCAGGCTCCCATGTACTCTGGTGCCATTGATGCAGTTAAGAAAACATTAGCAGCTGAAGGCCCCGCAGGCTTATACAAAGGTATGGGTGCACCACTGGCTATAGCAGCAGCCTTCAGAGCCGTGGTGTTCACAACCAAGGGACAAATGGAAGCCTTGTTGAGGTCCCATCCAGATGCCCCTCTTACTATAAAACAGCAGATTGTTTGTGGAGCTGGTGCTGGGCTTGCTCTTTCCATTGTGGCTTGCCCCACTGAACTCATTAAATGCAGGTTGCAGGCACAAAGTGTTGTTGCGGGTTCAGGAATAGCTGCTTTGGATGTCAAGTATGGAGGATCCATGGATGTGGCCATGCAAGTTCTGAGATCTGAAGGGGGAATGAGAGGTCTATTCAAGGGCATGGTTCCCACAATGGCTCGTGAGATTCCTGGAAATGCCATGGTGTTTGGTGTATATGAAGCAACAAAGCAAATACTTGCAGGGGGTTCTGATACATCTGGGCTAGGAAGAGGCTCCTTGATCGTTGCTGGAGGCCTGGCTGGAGCTCTAACGTGGTGCGTGATTTACCCAACTGATATAGTTAAGAGTTTGATTCAAGTGGATGATTACAGAAACCCAAAATTTTCTGGTTCCATTGATGCATTTAGAAAGATTCAAACTTCACAAGGGTTCAAAGGGCTTTACAGAGGTTTTGGTCCTGCAATAGCCCGAGGTGTTCCAGCAACTGCAGCTTGCTTCTTGGCTTATGAGATCACTAGATCAGCTCTGGGATGA 2313 0.463 MYDIGKRSLLMASHFCQMRWNGSLGCVNISIVEPISELHLKPLTRLSLGINNHKSLAKASDIQFSLLFHQVLWELAKACVCDVLPIDRQTIIKFSLMKEIPILQMGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPTPLPGKPLKYSGAIDAVKKTIAAEGPRGLYKGMGAPLATVAAFNAVLFSARGQMEALLRSHPGAPLTVKQQVVCGAGAGVVVSILACPTELIKCRLQAQSVVAGSGTATVAVKYGGPIDVARQVLRSEGGMKGLFKGMVPTMAREVPGNAIMFGVYEATKQLLAGGSDTSGLGRGSLIVAGGLAGASVWLAVYPTDVVKSVIQVDDYRNPKFSGALDAFRKIQASEGFKGLYKGFGPAIARSVPANAACFLAYEMTRSALVTAFIPRSALDIHQIRLLFGQNKINTVQYSGLRFRKFNIYIAGSVCDRMAITKLWFWDVSSSLELWLSLSHILMGDVAKDFMAGTVGGVAQLICGHPFDTIKVKLQSQPTQLHGQAPMYSGAIDAVKKTLAAEGPAGLYKGMGAPLAIAAAFRAVVFTTKGQMEALLRSHPDAPLTIKQQIVCGAGAGLALSIVACPTELIKCRLQAQSVVAGSGIAALDVKYGGSMDVAMQVLRSEGGMRGLFKGMVPTMAREIPGNAMVFGVYEATKQILAGGSDTSGLGRGSLIVAGGLAGALTWCVIYPTDIVKSLIQVDDYRNPKFSGSIDAFRKIQTSQGFKGLYRGFGPAIARGVPATAACFLAYEITRSALG 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1409 770 ProSiteProfiles Solute carrier (Solcar) repeat profile. 681 768 IPR018108 -
Dere09g1409 770 ProSiteProfiles Solute carrier (Solcar) repeat profile. 106 197 IPR018108 -
Dere09g1409 770 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 302 IPR018108 -
Dere09g1409 770 ProSiteProfiles Solute carrier (Solcar) repeat profile. 575 671 IPR018108 -
Dere09g1409 770 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 108 399 - -
Dere09g1409 770 Pfam Mitochondrial carrier protein 687 769 IPR018108 -
Dere09g1409 770 Pfam Mitochondrial carrier protein 207 304 IPR018108 -
Dere09g1409 770 Pfam Mitochondrial carrier protein 477 568 IPR018108 -
Dere09g1409 770 Pfam Mitochondrial carrier protein 318 402 IPR018108 -
Dere09g1409 770 Pfam Mitochondrial carrier protein 576 673 IPR018108 -
Dere09g1409 770 Pfam Mitochondrial carrier protein 108 199 IPR018108 -
Dere09g1409 770 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 106 400 - -
Dere09g1409 770 SUPERFAMILY Mitochondrial carrier 476 763 IPR023395 -
Dere09g1409 770 SUPERFAMILY Mitochondrial carrier 107 394 IPR023395 -
Dere09g1409 770 Gene3D Mitochondrial carrier domain 474 769 IPR023395 -
Dere09g1409 770 Gene3D Mitochondrial carrier domain 103 403 IPR023395 -
Dere09g1409 770 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 475 769 - -
Dere09g1409 770 ProSiteProfiles Solute carrier (Solcar) repeat profile. 475 566 IPR018108 -
Dere09g1409 770 ProSiteProfiles Solute carrier (Solcar) repeat profile. 312 399 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1409 Dere-ChrDere09 18093405 18103590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1409 495 764 Antiporters AT1G79900 31.769 2.53e-35 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1409 09 18093405 18103590 Dere09g1409 09 18093405 18103590 ECH