Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1392 ATGGCCATCGAAACCCAGGACACCACTGTCAGGGAAATCAAGCCCAAGAACAGGAGAATCATGGGCGCTGGAGGTCCTGATGATGAGGACAACAGGTGGCCGCCATGGTTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTACACGCCGATTCCCACAAGAGCGAATGCAATATGTATTGCTTGGATTGTATGAACGGCGCCCTCTGTTCTCTCTGCCTCGCCTACCACAGAGACCATCGTGCTATACAGATAAGGAGGTCCTCTTACCACGATGTGATTAGGGTCAATGAGATTCAGAAGGTGCTTGACATAACAGGCGTGCAGACCTACATTATAAACAGCGCAAGGGTAGTGTTCTTGAACGAGAGGCCTCAGCCAAGGCCCGGAAAAGGCGTCACCAACACTTGCGAAGTCTGCGAGCGTAGCCTTCTCGATTCCTACCGATTCTGTTCTCTGGGTTGCAAGATTGTTGGAACGTCGAGGAATTTTCAGAAGAAGAAACGATCAGCGGCAATGGCATCGGAATCAGAGGATTCATACAGCAGCAGCAGCAGCCATAGCCGGCACAAGAAGAGCAAAGAGCAGAGCTTCACTCCGTCAACACCACCGCCGACTTCGGTGAGTTACAGAACGGCCAAGAGAAGAAAGGGTATTCCCCACAGAGCACCAATGGGAGGACTAATCATAGAATACTAG 708 0.5071 MAIETQDTTVREIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAYHRDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRNFQKKKRSAAMASESEDSYSSSSSHSRHKKSKEQSFTPSTPPPTSVSYRTAKRRKGIPHRAPMGGLIIEY 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1392 235 CDD Bbox2 49 88 - -
Dere09g1392 235 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 27 228 - -
Dere09g1392 235 Pfam PLATZ transcription factor 89 160 IPR006734 -
Dere09g1392 235 MobiDBLite consensus disorder prediction 169 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1392 Dere-ChrDere09 17971220 17972704 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dere09g1392 PLATZ 6.6e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1392 09 17971220 17972704 Dere09g1392 09 17971220 17972704 ECH