Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere09g1375 | ATGGCTTCAGTTATCGGAGTTCCTGCAACACTGCAGTCAAACTTCGATTCCACTTATAGTTTAACATGCACCTCTTCGTTATTAAATATCCCATCTTCTTTTGCACGTTATAATGACACATCCACATCCAACCCCGGTTTCTATCTCCTCCACGTAAGTTTCCTTCAAAACACTCCAAACCGAGCTCTCATTTTCTTCCCCAGATCATCATTCAAAATCACTTCTTGTGCTCTCTTTTCCATCAAAGCTTCTTCTTCCTCTTTCCATTTCCAGGCCACAAAAATGCCAGACCGGCGTACATTCTCCGGCGACTCTCCGGCCATGGATGCGAAGGAGACAAAGAAGGAGAGAAAAGTTCCTCTACTAAAGTTGTTCTCTTTTGCAGACTCCTATGATTATGTACTAATGGCAATTGGATCTGTTGGTGCATGTGTTCACGGAGCTTCTGTTCCAGTTTTCTTCATCTTCTTTGGAAAGTTGATAGATGTCATAGGCTTGGCTTATCTCTTTCCCCAAGAAGCTTCTCACAAAGTTGCCAAGTATTCGTTGGATTTTGTGTATCTGAGTATAGCAATCATGTTTTCATCTTGGACAGAGGTGGCATGTTGGATGCATACTGGGGAACGCCAAACAGCGAAGATGAGAATGGCATATTTAAGATCAATGCTGAATCAAGACATTAGTCTGTTCGACACCGAAGCTTCAACTGGGGAGGTCATTTCTGCCATTTCCAGCGAAATAATCGTTGTTCAAGATGCAATATCAGAGAAGGTAGGGAATTTCTTGCACTACATAAGCCGATTCGTAGCGGGATTCACTATTGGATTTGTGAGAGTATGGCAGATCAGTCTAGTAACACTTTCAATCGTTCCCTTGATTGCCCTCGCTGGTGGTCTTTATGCTTACGTCACAATCGGGCTTATTGCCAAAGTCCGAAAAGCCTACGTTAGGGCTGGTGAAATTGCTGAAGAGGTCATAGGGAATGTCAGAACGGTTCAAGCATTTGCAGGAGAAGAGAGATCGGTGAGATCATACAAAGCCGCTCTCGTAAATACTTACAAAAATGGCCGGAAAGCAGGTTTAGCAAAGGGTCTGGGACTAGGCTCCATGCATTGTGTCCTGTTTCTGTCATGGGCCCTGCTTGTATGGTTTACCAGTGTTGTTGTTCACAAGAAGATCGCCAATGGAGGCGATTCCTTCACTACCATGCTCAATGTTGTCATCTCTGGCCTGTCACTTGGGCAGGCAGCACCAGATATCTCTGCATTTATCAGAGCAAAGGCTGCAGCCTACCCCATTTTTGAGATGATAGAGAGGGAAACAGTGAGCAAAATCAGCTCAAAAACTGGTCACAAATTAAGAAAATTGGATGGTTGCATCCAATTTAAAGATGTCTGTTTCAGATATCCATCTCGTCCTGATATAGTTATCTTCAACAACCTCTTTCTTGACATTCCTCCTGCCAAAATTGTAGCCCTAGTGGGAGGAAGTGGCTCTGGAAAGAGTACTGTTATATCTTTGATTGAGCGCTTCTACGAGCCCCATTCTGGACAGATACTATTAGACGGGAATGATATCCGGGAGCTCGATATCAAATGGCTAAGAAGTCAAATTGGGCTGGTTAATCAAGAACCTGCCCTTTTTACCACAAGCATCAGAGAAAACATACTGTATGGAAAAGAAGATGCCACTCTTGAAGAACTTAAACGTGCTGTGAAGCTTTCAGATGCTCAGTCTTTCATTAACAATCTTCCTGACAGATTGGAAACTCAGGTGGGTGAGAGAGGGGTACAACTATCAGGTGGACAAAAGCAAAGGATTGCAATATCTCGAGCCATTGTGAAGAACCCTTCAATCCTTTTATTGGATGAAGCTACCAGTGCTCTGGATGCAGAGTCTGAGAAGAGTGTACAGGAAGCTCTTGATCGTGTCATGGTTGGTAGAACAACTGTCATAGTGGCACACAGGCTTTCTACAATTAGGAATGCAGATATGATTGCTGTTGTACAGGGAGGGAGAATTGTGGAAACTGGTAATCATGAGGAGCTCATTTCTAACCCAAATAGCGTATATGCATCTCTAGTTCAACTCCAGGAGACAGGTTCTTTGCAAAGCCACCAGACAGTAGGTCCTACCACTAGCTTGGCCAAGCTGCCAAGCATAAGGTACTCAAGAGAATTGTCCCGTACAACAAGCTCTGGCGGTAGTTTTCGGTCAGATAAAGAGTCTTTAGGCCATGTTTGTGCTGATGAAGTGGAAAGTGTTGCCAAGTCAAGTCATGTTACCATAAGAAGACTTTATTCAATGGTTGGGCCTGATTGGTTCTATGGGGTGTTTGGCACCTTTTGTGCATTTATTGCAGGGGCCCAGATGCCACTTTTTGCTCTTGGAATCTCTCATGCCCTTGTATCATACTATATGGACTGGGAAACAACACGTCATGAGGTCAGAAAAATTGCTTTCCTGTTCTGTGGGGCAGCAGTTGTGACTGTTATTGTGCATGCCATTGAGCATCTGTCTTTTGGAATCATGGGCGAGCGACTTACTCTTCGTGTGCGAGAAGCAATGTTTTCTGCTATTTTGAAGAATGAAATTGGCTGGTTTGATGAAACAAGCAATACAAGTTCAATGCTATCATCACGTTTAGAGACGGATGCAACTTTGTTACGAACTATAGTTGTTGATAGGTCTACAATTCTCTTACAGAATGTTGGTCTGGTTGTTGCTTCATTTATTATTGCCTTCATCTTGAACTGGAGGATAACGCTGGTTGTCTTGGCCACATACCCTTTGATCATTAGTGGTCATATCAGCGAGAAACTTTTCATGAAAGGCTATGGTGGCAACTTGAGCACGGTATATCTGAAAGCCAACATGCTGGCTGGGGAAGCAGTGAGTAACATACGTACTGTTGCTGCATTTTGTTCTGAAGAAAAGGTCCTAGGACTTTATGCTAATGAGCTTGTTGAGCCTTCCAAGCTTTCATTCAAAAGGGGCCAAATTGCTGGCTTATTTTATGGCATTTCACAGTTCTTCATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGTTCTGTTTTGATGGAAAAGGAGCTCGCTAGCTTCAAATCAGTCATGAAGTCATTTATGGTTCTAATTGTAACAGCATTGGCCATGGGGGAGACTTTGGCTCTGGCTCCAGATCTTTTGAAAGGGAACCAAATGGTTGCATCTGTTTTCAACGTGATGGATAGAAAGTCAGGAATAATGGGTGATGCCGGAGAAGAGTTAAAGACGGTGGAAGGAACTATTGAGCTAAAAAGCATCCATTTTAGCTACCCTTCAAGGCCAGATGTTGTGATTTTTAAAGATTTTAATCTGAGAGTGCCGGCAGGCAAGAGTATTGCCTTAGTGGGGCAAAGTGGTTCTGGCAAAAGCTCTGTCATCTCCCTCATACTCAGATTTTATGATCCAACATCTGGGAGAGTGATGATTGATGGAAAAGACATTAGGAGACTCAATCTAAAATCTCTGAGGAAGCATATTGGTCTGGTGCAGCAAGAACCAGCCCTTTTTGCGACATCAATTTATGAAAACATCTTATATGGAAAGGAAGGAGCCTCTGATTCAGAGGTAATTGAAGCAGCTAAGCTTGCCAATGCTCATAGTTTCATCAGTTCTCTTCCAGATGGCTATAGCACCAAAGTGGGCGAACGAGGCGTTCAGTTATCCGGTGGCCAGAGACAAAGGGTAGCCATAGCCCGAGCTGTTTTAAAGAACCCAGAAATCTTGCTGCTAGATGAAGCCACTAGTGCGCTGGATGTGGAATCCGAGCATGTGGTGCAGCAAGCTCTGGACAGATTGATGCAGAACAGGACAACAGTTATGGTGGCACACAGGCTATCCACAATAAGAAATGCAGATCAAATCTCAGTTTTGCAGAACGGGAAGATAATAGAACAAGGAACTCATTCAACTCTTGTAGAGAACAGGAATGGAGCATATTTTAAATTAGTCAACCTTCAACAACAACAGCGGCAATAA | 4023 | 0.4343 | MASVIGVPATLQSNFDSTYSLTCTSSLLNIPSSFARYNDTSTSNPGFYLLHVSFLQNTPNRALIFFPRSSFKITSCALFSIKASSSSFHFQATKMPDRRTFSGDSPAMDAKETKKERKVPLLKLFSFADSYDYVLMAIGSVGACVHGASVPVFFIFFGKLIDVIGLAYLFPQEASHKVAKYSLDFVYLSIAIMFSSWTEVACWMHTGERQTAKMRMAYLRSMLNQDISLFDTEASTGEVISAISSEIIVVQDAISEKVGNFLHYISRFVAGFTIGFVRVWQISLVTLSIVPLIALAGGLYAYVTIGLIAKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERSVRSYKAALVNTYKNGRKAGLAKGLGLGSMHCVLFLSWALLVWFTSVVVHKKIANGGDSFTTMLNVVISGLSLGQAAPDISAFIRAKAAAYPIFEMIERETVSKISSKTGHKLRKLDGCIQFKDVCFRYPSRPDIVIFNNLFLDIPPAKIVALVGGSGSGKSTVISLIERFYEPHSGQILLDGNDIRELDIKWLRSQIGLVNQEPALFTTSIRENILYGKEDATLEELKRAVKLSDAQSFINNLPDRLETQVGERGVQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADMIAVVQGGRIVETGNHEELISNPNSVYASLVQLQETGSLQSHQTVGPTTSLAKLPSIRYSRELSRTTSSGGSFRSDKESLGHVCADEVESVAKSSHVTIRRLYSMVGPDWFYGVFGTFCAFIAGAQMPLFALGISHALVSYYMDWETTRHEVRKIAFLFCGAAVVTVIVHAIEHLSFGIMGERLTLRVREAMFSAILKNEIGWFDETSNTSSMLSSRLETDATLLRTIVVDRSTILLQNVGLVVASFIIAFILNWRITLVVLATYPLIISGHISEKLFMKGYGGNLSTVYLKANMLAGEAVSNIRTVAAFCSEEKVLGLYANELVEPSKLSFKRGQIAGLFYGISQFFIFSSYGLALWYGSVLMEKELASFKSVMKSFMVLIVTALAMGETLALAPDLLKGNQMVASVFNVMDRKSGIMGDAGEELKTVEGTIELKSIHFSYPSRPDVVIFKDFNLRVPAGKSIALVGQSGSGKSSVISLILRFYDPTSGRVMIDGKDIRRLNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASDSEVIEAAKLANAHSFISSLPDGYSTKVGERGVQLSGGQRQRVAIARAVLKNPEILLLDEATSALDVESEHVVQQALDRLMQNRTTVMVAHRLSTIRNADQISVLQNGKIIEQGTHSTLVENRNGAYFKLVNLQQQQRQ | 1340 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere09g1375 | 1340 | CDD | ABC_MTABC3_MDL1_MDL2 | 1097 | 1335 | - | - | |
Dere09g1375 | 1340 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 767 | 1082 | - | - | |
Dere09g1375 | 1340 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 136 | 433 | - | - | |
Dere09g1375 | 1340 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 460 | 696 | IPR003439 | GO:0005524 | |
Dere09g1375 | 1340 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1097 | 1333 | IPR003439 | GO:0005524 | |
Dere09g1375 | 1340 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 778 | 1064 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere09g1375 | 1340 | FunFam | ABC transporter B family member 4 | 1087 | 1340 | - | - | |
Dere09g1375 | 1340 | SUPERFAMILY | ABC transporter transmembrane region | 116 | 430 | IPR036640 | GO:0005524|GO:0016020 | |
Dere09g1375 | 1340 | ProSitePatterns | ABC transporters family signature. | 1236 | 1250 | IPR017871 | GO:0005524|GO:0016887 | |
Dere09g1375 | 1340 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 137 | 425 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere09g1375 | 1340 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1090 | 1335 | IPR027417 | - | |
Dere09g1375 | 1340 | Pfam | ABC transporter | 479 | 627 | IPR003439 | GO:0005524 | |
Dere09g1375 | 1340 | Gene3D | ABC transporter type 1, transmembrane domain | 123 | 1066 | IPR036640 | GO:0005524|GO:0016020 | |
Dere09g1375 | 1340 | ProSitePatterns | ABC transporters family signature. | 599 | 613 | IPR017871 | GO:0005524|GO:0016887 | |
Dere09g1375 | 1340 | Pfam | ABC transporter | 1116 | 1264 | IPR003439 | GO:0005524 | |
Dere09g1375 | 1340 | CDD | ABC_MTABC3_MDL1_MDL2 | 460 | 698 | - | - | |
Dere09g1375 | 1340 | Gene3D | - | 1087 | 1340 | IPR027417 | - | |
Dere09g1375 | 1340 | SUPERFAMILY | ABC transporter transmembrane region | 764 | 1078 | IPR036640 | GO:0005524|GO:0016020 | |
Dere09g1375 | 1340 | PANTHER | ABC TRANSPORTER B FAMILY | 110 | 702 | IPR039421 | - | |
Dere09g1375 | 1340 | FunFam | ABC transporter B family member 1 | 450 | 699 | - | - | |
Dere09g1375 | 1340 | SMART | AAA_5 | 487 | 679 | IPR003593 | GO:0016887 | |
Dere09g1375 | 1340 | SMART | AAA_5 | 1124 | 1310 | IPR003593 | GO:0016887 | |
Dere09g1375 | 1340 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 451 | 698 | IPR027417 | - | |
Dere09g1375 | 1340 | Gene3D | - | 450 | 699 | IPR027417 | - | |
Dere09g1375 | 1340 | Pfam | ABC transporter transmembrane region | 138 | 408 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Dere09g1375 | 1340 | Pfam | ABC transporter transmembrane region | 779 | 1050 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere09g1375 | Dere-ChrDere09 | 17813951 | 17823562 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere09g1375 | 106 | 1336 | Calmodulin-binding Proteins | AT2G36910 | 49.563 | 0.0 | 1208 |