Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1373 ATGGTTTCTAGGTCGTATTCTAACTTGTTAGATCTTACTTCCTGCGACTCCCCAACTTTTGGTCGTGAGAGGAAGAGGCTTCCGCGAGTGGCGACTGTTGCTGGAGTCCTTTCTGAACTAGATGATGAGAACAACAGTGCTGGCTCAGATGCTCCCTCATCCATCTCTCAAGATCGGATGATTGTTGTCGGTAACCAACTTCCATTACGGGCGCACAGAAAAGATAATGGTAAGTGGGACTTCACCTTGGATGAAGACTCGCTTCTTTTACAGCTGAAAGATGGTCTTGGAGATGATGTAGAAGTGATATATATTGGGTGTCTTAAAGAAGAAATTGATGTAAGCGAGCAAGATGATGTTGCTCAGTACTTGCTTGACACTTTCAAATGTGTACCTACGTTCCTCCCTCCTGATCTATTTAGCAAATTCTATCATGGGTTCTGCAAACAGCATCTATGGCCTTTATTTCACTACATGCTTCCATTGTCACCTGATCTGGGTGGTCGATTCGATCGGTCTCTTTGGCAAGCTTATGTTTCTGTGAACAAGATATTTGCAGATAAAGTAATGGAAGTCATTAGCCCTGATGATGACTTTGTGTGGGTTCATGACTACCATCTGATGGTTCTGCCGACGTTTTTAAGAAAGAGATTTAACAGGGTGAGGCTAGGATTCTTCCTCCACAGTCCATTCCCTTCCTCTGAGATATACCGAACACTTCCGGTGAGGGATGAACTTCTTAGAGCTCTTCTGAACTCTGACCTTATTGGGTTTCATACTTTTGATTATGCAAGGCACTTCCTCTCTTGTTGCAGTAGAATGCTTGGGCTTTCTTATCAATCCAAGCGGGGGTACATAGGTCTTGAGTATTATGGCAGAACTGTTAGTATTAAGATACTTCCTGTTGGAATTCATATAGGTCAACTTCAATCTGTCATGAATCTTCCTGAGACTGAAAGCAAGGTCAGAGACTTGCGAGACCAGTTCAAAGGTCAAACTGTGATGCTTGGAGTTGATGACATGGATATCTTCAAAGGAATTAGCTTAAAACTTTTGGCCATGGAACAATTACTTTTGCAACATCCGGAAAAGAGGGGCAAAGTTTTAATGGTCCAAATTGCAAACCCTGCAAGAGGCCGGGGGAAGGATGTACAGGAGGTACAAAGTGAAACTTACGCCACAGTAAAAAAGATAAATAATGCATTTGGAAGGCCTGGATACACACCTGTGATCTTGATTGATACACCACTTCAGTTCTATGAGCGAATTGCTTATTATGTGATTGCAGAATGTTGTCTTGTTACAGCAGTGCGAGATGGGATGAACCTTATACCTTACGAATATGTCATATGTCGACAAGGAAATGAGAAACTAGACCAGATTTTGGGGATAAATCCATATACTCAAAAGAAGAGCATGCTAGTGGTATCTGAGTTCATTGGGTGCTCCCCATCATTAAGTGGGGCAATTCGAGTGAATCCATGGAACATTGATGCTGTTGCTGAAGCTATGGATTCTGCCCTTGTAGTCCCAGAGTCTGAAAAACAGATGCGACATGAGAAGCATTATAGGTATGTCAGTACACATGATGTTGCATATTGGGCACGTAGCTTTTTGCAAGATCTGGAAAGGGCATGTAGGGACCATCTCAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGATTTCGGGTAATGGCTTTAGATCCAAATTTCAGAAAGCTTTCAGTTGAGCATATTGTTTCAGCTTATAAGAGGACCAATCACCGAGCAATTCTTTTGGATTATGATGGTACTATGATGCAGCCTGGATCAATTAGTACAACACCTAATATGGAGGCTGTTGGAATCTTGAAAAGCTTGTGCAAAGACACTGATAATGTTGTTTTTATTGTTAGTGGGAAGGAAAGAAAGACTCTGACTAATTGGTTTTCTTCATGTGAAAGGCTTGGGATCGCTGCTGAGCATGGTTATTTTGTGAGGACAAATCGTGATGCAGAATGGGAAACTTGTCTTTCTGTGCCTGATTTTGACTGGAAACAGATTGCTGAGCCAGTAATGCAATTATACACTGAAACAACTGATGGTTCTAACATTGAGGCCAAAGAGAGTGCTCTTGTTTGGAATTACCAGTATGCAGACCGGGATTTTGGTTCATGCCAGGCTAAGGAGCTTCTAGATCATCTGGAAAGTGTTCTTGCCAATGAGCCTGTTTCTGTTAAAAGTGGTCCCCACATTGTAGAAGTTAAACCCCAGGGTGTCAATAAGGGTATTGTAGCAGAATGTCTTCTTCAAACCATGCGCGAAAAGGGAGTACTTCCAGATTTTGTTCTATGCATTGGGGATGACAGATCAGATGAGGACATGTTTGAGGTAATAATGAGCGCAAGGGCCTCTTTGTCCCCTGTAGCCGAAGTGTTCGCTTGCACAGGAGGGCAGAAACCAAGCAAGGCCAAGTATTACTTAGAAGACACAAGTGAGATATTGAGGATGCTGCAAGGCCTTGCCAATGCTTCAGAGCTGTCTGCTAGAAGTTCGTCCCAACCTTCACACTGA 2556 0.428 MVSRSYSNLLDLTSCDSPTFGRERKRLPRVATVAGVLSELDDENNSAGSDAPSSISQDRMIVVGNQLPLRAHRKDNGKWDFTLDEDSLLLQLKDGLGDDVEVIYIGCLKEEIDVSEQDDVAQYLLDTFKCVPTFLPPDLFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMNLPETESKVRDLRDQFKGQTVMLGVDDMDIFKGISLKLLAMEQLLLQHPEKRGKVLMVQIANPARGRGKDVQEVQSETYATVKKINNAFGRPGYTPVILIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYVICRQGNEKLDQILGINPYTQKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALVVPESEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVMALDPNFRKLSVEHIVSAYKRTNHRAILLDYDGTMMQPGSISTTPNMEAVGILKSLCKDTDNVVFIVSGKERKTLTNWFSSCERLGIAAEHGYFVRTNRDAEWETCLSVPDFDWKQIAEPVMQLYTETTDGSNIEAKESALVWNYQYADRDFGSCQAKELLDHLESVLANEPVSVKSGPHIVEVKPQGVNKGIVAECLLQTMREKGVLPDFVLCIGDDRSDEDMFEVIMSARASLSPVAEVFACTGGQKPSKAKYYLEDTSEILRMLQGLANASELSARSSSQPSH 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1373 851 NCBIfam HAD-IIB family hydrolase 592 794 IPR006379 -
Dere09g1373 851 Pfam Trehalose-phosphatase 593 826 IPR003337 GO:0003824|GO:0005992
Dere09g1373 851 Gene3D Glycogen Phosphorylase B; 52 310 - -
Dere09g1373 851 FunFam Trehalose-6-phosphate synthase 2 673 752 - -
Dere09g1373 851 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 310 - -
Dere09g1373 851 SUPERFAMILY HAD-like 590 836 IPR036412 -
Dere09g1373 851 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 719 848 - -
Dere09g1373 851 Gene3D Glycogen Phosphorylase B; 311 527 - -
Dere09g1373 851 CDD HAD_TPP 591 827 - -
Dere09g1373 851 CDD GT20_TPS 59 543 IPR001830 GO:0003824|GO:0005992
Dere09g1373 851 FunFam Alpha,alpha-trehalose-phosphate synthase 312 527 - -
Dere09g1373 851 NCBIfam trehalose-phosphatase 589 836 IPR003337 GO:0003824|GO:0005992
Dere09g1373 851 Pfam Glycosyltransferase family 20 59 543 IPR001830 GO:0003824|GO:0005992
Dere09g1373 851 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 34 837 IPR001830 GO:0003824|GO:0005992
Dere09g1373 851 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 589 706 - -
Dere09g1373 851 Gene3D - 589 706 IPR023214 -
Dere09g1373 851 Gene3D - 715 849 IPR023214 -
Dere09g1373 851 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1373 Dere-ChrDere09 17797658 17800989 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1373 1 836 Trehalose Biosynthesis Gene Families AT4G17770 79.524 0.0 1431