Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1347 ATGGGTGGCAGCGAAATGGATAAAACCCCAAAAGAGAAGGAGCCAAAGACACCTCCAGCTACGTCACAGGAGCAATCTTCAACCCCTGGCATTGGAACAATTAATCCTGATTGGACCAGCTTTCAGGCATATTCTCCTATACCTCCACATGGGTTCTTGGCATCAAGTCCCCAAGCCCATCCATATGTGTGGGGTGTCCAGCATATTATGCCTCCTTATGGTACCCCACCGCATCCCTATGTTGCAATGTATCCCCATGGTGGTATATATGCTCATCCATCTATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCTAATGGTATTGCTGAGGCCTCAGGAAATACTCTTGGAGGCATGGAAACTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCTATTAAAAGATCAAAAGGAAGTTTAGGTAGTTTGAATATGATTACGGGGAAGAACATCGAACTTAGTAGAACACCAGGGGCATCTGCTAATGGAGTTCATTCAAAAAGTGGTGAGAGTGCAAGTGAAGGTACTAGTGAAGGCAGTGATGCAAATTCTCAGAATGACTCACAGTTGAAATCTGAGGGAAGGCAGGATTCTTTGGAAGCTGAACCATCCCAAAATGGAAGTTCAGTGCATGCTCCACAAAATGGGGGACTTACTGCATCACATGCGATGGTTAATCAAACTATGACTATAATGCCTATGTCTGCTGCTGGTGCTCCTGGTGGAGTTCCTGGTCCCACTACAAATTTAAACATAGGAATGGATTATTGGGGTGCACCCACGTCATCCACTATTCCTGCACTGCGTGGAAAGCTTCCTTCTACTGCTGTTGCTGGAGGGATGGTTACTGCTGGATCCCGGGAGAGTGTTCAGTCACAAGTTTGGCTGCAGGATGAAAGAGAGTTGAAGAGACAAAGACGGAAGCAGTCTAATAGGGAATCTGCTCGCAGATCCAGGTTGCGCAAGCAGGCTGAATGTGATGAACTAGCCCAGCGTGCTGAGGCTTTAAAGGAGGAAAATGCTTCTCTCCGGTCTGAAGTGAGTCGGATCAGGAGTGAATATGAGCAGCTGCTCTCAGAAAATGCTGCCCTCAAGGAGAAACTTGGGGAATTACCTGAGAATGAGGATCTTAGATCCAGCCGGAATGGCCAACATGTGGATAGTGACACTCAACAGTCTGAGCAGACAGAAGCTGTGCAGGGCGGTCATTAG 1230 0.4732 MGGSEMDKTPKEKEPKTPPATSQEQSSTPGIGTINPDWTSFQAYSPIPPHGFLASSPQAHPYVWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTLGGMETDGKPPEVKEKLPIKRSKGSLGSLNMITGKNIELSRTPGASANGVHSKSGESASEGTSEGSDANSQNDSQLKSEGRQDSLEAEPSQNGSSVHAPQNGGLTASHAMVNQTMTIMPMSAAGAPGGVPGPTTNLNIGMDYWGAPTSSTIPALRGKLPSTAVAGGMVTAGSRESVQSQVWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSEYEQLLSENAALKEKLGELPENEDLRSSRNGQHVDSDTQQSEQTEAVQGGH 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1347 409 MobiDBLite consensus disorder prediction 304 331 - -
Dere09g1347 409 MobiDBLite consensus disorder prediction 19 39 - -
Dere09g1347 409 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 312 327 IPR004827 GO:0003700|GO:0006355
Dere09g1347 409 MobiDBLite consensus disorder prediction 372 389 - -
Dere09g1347 409 MobiDBLite consensus disorder prediction 205 223 - -
Dere09g1347 409 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Dere09g1347 409 CDD bZIP_plant_GBF1 310 360 IPR045314 GO:0003700|GO:0006355
Dere09g1347 409 MobiDBLite consensus disorder prediction 1 39 - -
Dere09g1347 409 MobiDBLite consensus disorder prediction 371 409 - -
Dere09g1347 409 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 307 370 IPR004827 GO:0003700|GO:0006355
Dere09g1347 409 PANTHER G-BOX-BINDING FACTOR 3-RELATED 13 400 IPR044827 GO:0003700|GO:0006355|GO:0043565
Dere09g1347 409 SUPERFAMILY Leucine zipper domain 308 364 IPR046347 GO:0003700|GO:0006355
Dere09g1347 409 Gene3D - 308 362 - -
Dere09g1347 409 MobiDBLite consensus disorder prediction 146 198 - -
Dere09g1347 409 Pfam Disordered region downstream of MFMR 135 272 - -
Dere09g1347 409 Coils Coil 325 373 - -
Dere09g1347 409 MobiDBLite consensus disorder prediction 1 18 - -
Dere09g1347 409 SMART brlzneu 305 369 IPR004827 GO:0003700|GO:0006355
Dere09g1347 409 MobiDBLite consensus disorder prediction 390 409 - -
Dere09g1347 409 MobiDBLite consensus disorder prediction 120 223 - -
Dere09g1347 409 Pfam bZIP transcription factor 305 367 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1347 Dere-ChrDere09 17500649 17507242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1347 1 403 bZIP Transcription Factor Family AT2G35530 63.415 3.82e-170 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere09g1347 MFMR_assoc 1.4e-60 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1347 09 17500649 17507242 Dere09g1347 09 17500649 17507242 ECH