Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1346 ATGCGTGCGACGGGCTTCGACACTTCTGTTCTACTGTCTACAGCAGAAGAAAGTAAGACCAGAGGATTAAGGAGGATTGAGGGGTCCGTTCTAGGGGATGAAAGATGGTTAGAGCAGGAAACTACTATATTGGGAGCAAGGCTTAGCGTCAAGAAAGCAGGCATAACCCCTGCCGATGTTGGCTTCTTTGAAGGAGACCCCTTCAAAATTGGCCAATTTGTATTTACTGCCTCATCCATCACAAAGGCTGCTGGTTTTCATAAGTTGTCAGAGCAAGCTGTTATCATGAAGAAGACAGCAATTGAGAGGAGGGTTGGGATGAATGTTGTCAGCAATGACAAGATTGGTATATTAGCACTCAACAAACTCACAGTCAATATACACTTAATGGGGTTCTTTATAAAAGATGTTTACAAGGGCGCTTCAGTTCGGTTTAGAGCTAGTGCTTCAAAGGTGGTGAACCAGGATGTCATAAATGATTGCATTGTTGGTCCGGGAGGAAAAGGGAATTTGCATTAG 519 0.4393 MRATGFDTSVLLSTAEESKTRGLRRIEGSVLGDERWLEQETTILGARLSVKKAGITPADVGFFEGDPFKIGQFVFTASSITKAAGFHKLSEQAVIMKKTAIERRVGMNVVSNDKIGILALNKLTVNIHLMGFFIKDVYKGASVRFRASASKVVNQDVINDCIVGPGGKGNLH 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1346 172 Gene3D - 108 122 IPR023214 -
Dere09g1346 172 PANTHER CALCIUM-TRANSPORTING ATPASE 77 164 - -
Dere09g1346 172 Gene3D - 123 163 IPR023299 GO:0000166
Dere09g1346 172 Gene3D - 77 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1346 Dere-ChrDere09 17498413 17499739 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1346 30 85 Primary Pumps ATPases AT1G80660 45.000 3.43e-06 44.3