Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1331 ATGGCAGAAAGTCCAGTTTTGTTTTTACTGGACAAGCTGACTTCCTTACTGCAAGAAGAAGTGCAGCTGCTGAAGGGGGTTCGCACAGAGGTTCAATTCATCAAAGATGAATTAGAGCGCCTCAAGGCCATCTTAAGGGTGGCTGATGCTTTGGAGGACAGAGACCCTGAAGTCAAAGTTTGGGTGAAGCAAGTGAGAGATGTAGCCCATGACATGGAAGATGCCATAGATGAGTTTACTCTTCGCCTTGTGAATCGTCATGAGCATGGCCACAATTCTTCTCTGCGTAAGTTTGCTTCCTTCATTAAGGCTCTCAGAGCTCGGCATCGGATTGCTTCAGAGATACAAGAGATCAAAGGCAGAGTGGAAACCATCTCCAAGGGTCGTCGTAGCCTAACTGAGACAGCGTCAAGCTCATTTCGGTATGCATCAAGGCTTGATAGCCAAGGAGATGCACTTCTACTAGAGGAAGCTGATCTTGTGGGTATTGACAAGCCCAAAAAGCAGCTACTTGAGTTGCTTTTCAAAGAGGAACCTGGAAGGGTAGTTATTCCAATTTATGGAATGGGAGGACTGGGGAAAACCACATTGGCAAAGCAGGTCTACGAGGACCAAAAAGTGAAGAAGCGTTTCAGGATGCATGCTTGGGTCACTGTTTCCCAATCTTTCAAAATCAATGAGCTCCTAAGAGACCTGGTTCAACAGCTCTATAATGTCATAGGAAAACCAGCTCCTGAAGCAGTTGTCACAATGAAAAGTGACAAGCTAAAAGAGGTGATCAAGAATTTGCTTCAGCAAAGCAGATACCTCATCGTTCTGGATGATGTATGGCGGGTAAATGCATGGGATGCTATCAAACATGCTTTGCCTAATAACAACTATGGCAGTAGAATAATGCTTACCACACGAAATAAAGATGTAGCCGCTTCTTCCTGCACTGAATTGCAGGGTAAGGTCTATAACCTGGAATTTTTACCTCAGCAAGAAGCATGGTCTCTTTTCTGTAAAAAGACATTTCAGGGGAATCCATGCCCCGCTCATTTGGAGGAGTCCTGCACGATTATCTTGAAAAGGTGTGGGGGATTGCCTCTAGCAATTGTGGCAATTAGTGGTGCTTTGGCTACAAAAGACAAGACCAACATAGAAGAATGGCTGATTGTTTGTAAAAGTTTTGCGTCTGAAATTGAAGGCAATGACAAACTGGAGGATATGAAGAAAGTGCTTTCCCTAAGTTTCAATGACTTACCTTACTATCTTAAATCTTGTTTGTTGTACCTAATCATCTTTCCAGAATTTTATGCTATTGAGCATATGAGGTTGATACGGTTGTGGATAGCTGAAGGATTTGTCAATGGAGAAGAAGGAAGGACTCCAGAAGAAGTTGCAGAGAGTTACCTGAAGGAGCTCTTGAACAGGAGTCTGATCCAAGTGGTAGAGAAAGGCAGTGATGGCAGGATGAAGACTTGTCGCGTACATGACTTTCTACGGGACATAATCAATTTCAAGTCAAGGGACCAGAACTTTGCAACAATAGCCAAAGACCAGGACATAATCTGGCCAGAAAGAGTTCGGCGCCTATCAGTAATAAACAGTTTACAGAACATACAGCAAAATAAGACCTCATTCCAACTACGTTCTCTGTTATTGTTTGCTTTATCAGATTCGCTTGATCATTTTCCCATATATGCATTATTTTCATATGGTTGTAGGCTACTTAAGGTGCTAGATTTGCAGGATGCACCTTTGGAGTTGTTTCCTGCTGAAATTGTCAACCTTTACCACCTGAAGTATCTAAGCTTGAAGAATACAAAGGTGAAAAACATTCCAGGCTCCATTAAGAAGCTTCAAAACCTGGAGACATTAGATCTTAAACACTCCTATGTCACTGAATTGCCAGTTGAAATGTTGGAGCTGCATCGTCTACGCCATCTCCTGGTGTATCGTTATGAGATTGAATCCTATGCTCATTTCCACTCAAGGCATGGTTTCAAGTTGTCAGCTCCAATAGGATGTATGCAATCCCTGCAAAAGCTTTGTTTTATAGACGCAGACCAAGGAACTGAGGACTTGATGGTTGAGCTAGGAAAGCTAACTCAACTCAGGAGGCTGGGCATTAGAAAGATGAGGCAAGAAGATGGGGCTGCTTTGTGCTCATCCATTCAGATGATGACCAATCTCAGGTCGCTGTCCATAACTGCAACAGAAGAAGATGAGATCATTGATATCCAGAACATTGCCAGGCCACCTCCGTATCTTCGGCAATTATACCTAAGTGGACGTTTAGAGAAGCTACCTGAATGGATACCCTCTCTCCAAAATTTGGTCAGAGTGTATCTAAAATGGAGCAGGTTAGAGGAGGATCCTCTGGTGTATCTTCAAGATTTGCCCAATCTAGTACATCTCGAGTTTCTTCAGGTTTATGTTGGTGACACATTGCATTTCAAGGCAAAGGGATTTCCAAGTCTGAAGCTTTTAGGTCTTGATGATTTAGATGGGCTAAAATCTGTGATAGTGGAGGAGGGAGCAATGCCTAATCTGAAAAGATTGATCATCCAGCGCTGTGGATCATTGAAGCAGGTACCCTCAGGCATAGAACATTTAACTAAGCTAAAAGCAATTGATTTCTTTGATATGCCTGATGAATTGATTATGGCACTGCGTCCGAATGGAGGCGAAGATTATTGGAGAGTCGAACACGTACCAGTAGTTTATTCAACATATTGGAGGTCTGGTGGTTGGGATGTCCGCTCATTGGAGACTTTTGGGGAGAGAGAGAGTTCTTCCAGTCTTAATGCTGCAATCGGCAGCCATGAGCTTCGTACTCTCTGGAAGGTTTAA 2838 0.4316 MAESPVLFLLDKLTSLLQEEVQLLKGVRTEVQFIKDELERLKAILRVADALEDRDPEVKVWVKQVRDVAHDMEDAIDEFTLRLVNRHEHGHNSSLRKFASFIKALRARHRIASEIQEIKGRVETISKGRRSLTETASSSFRYASRLDSQGDALLLEEADLVGIDKPKKQLLELLFKEEPGRVVIPIYGMGGLGKTTLAKQVYEDQKVKKRFRMHAWVTVSQSFKINELLRDLVQQLYNVIGKPAPEAVVTMKSDKLKEVIKNLLQQSRYLIVLDDVWRVNAWDAIKHALPNNNYGSRIMLTTRNKDVAASSCTELQGKVYNLEFLPQQEAWSLFCKKTFQGNPCPAHLEESCTIILKRCGGLPLAIVAISGALATKDKTNIEEWLIVCKSFASEIEGNDKLEDMKKVLSLSFNDLPYYLKSCLLYLIIFPEFYAIEHMRLIRLWIAEGFVNGEEGRTPEEVAESYLKELLNRSLIQVVEKGSDGRMKTCRVHDFLRDIINFKSRDQNFATIAKDQDIIWPERVRRLSVINSLQNIQQNKTSFQLRSLLLFALSDSLDHFPIYALFSYGCRLLKVLDLQDAPLELFPAEIVNLYHLKYLSLKNTKVKNIPGSIKKLQNLETLDLKHSYVTELPVEMLELHRLRHLLVYRYEIESYAHFHSRHGFKLSAPIGCMQSLQKLCFIDADQGTEDLMVELGKLTQLRRLGIRKMRQEDGAALCSSIQMMTNLRSLSITATEEDEIIDIQNIARPPPYLRQLYLSGRLEKLPEWIPSLQNLVRVYLKWSRLEEDPLVYLQDLPNLVHLEFLQVYVGDTLHFKAKGFPSLKLLGLDDLDGLKSVIVEEGAMPNLKRLIIQRCGSLKQVPSGIEHLTKLKAIDFFDMPDELIMALRPNGGEDYWRVEHVPVVYSTYWRSGGWDVRSLETFGERESSSSLNAAIGSHELRTLWKV 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1331 945 Gene3D - 152 315 IPR027417 -
Dere09g1331 945 Gene3D - 412 502 IPR036388 -
Dere09g1331 945 Pfam NB-ARC domain 165 413 IPR002182 GO:0043531
Dere09g1331 945 Coils Coil 24 54 - -
Dere09g1331 945 PANTHER DISEASE RESISTANCE PROTEIN RP 31 855 IPR044974 GO:0006952
Dere09g1331 945 Pfam Rx N-terminal domain 7 93 IPR041118 -
Dere09g1331 945 Gene3D - 325 411 IPR042197 -
Dere09g1331 945 FunFam Probable disease resistance protein At1g63360 412 501 - -
Dere09g1331 945 CDD RX-CC_like 2 127 IPR038005 -
Dere09g1331 945 Gene3D - 6 112 - -
Dere09g1331 945 SUPERFAMILY L domain-like 491 881 - -
Dere09g1331 945 FunFam Probable disease resistance protein At1g61300 151 315 - -
Dere09g1331 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 426 IPR027417 -
Dere09g1331 945 PRINTS Disease resistance protein signature 613 629 - -
Dere09g1331 945 PRINTS Disease resistance protein signature 183 198 - -
Dere09g1331 945 PRINTS Disease resistance protein signature 263 277 - -
Dere09g1331 945 PRINTS Disease resistance protein signature 359 373 - -
Dere09g1331 945 Gene3D Ribonuclease Inhibitor 516 886 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1331 Dere-ChrDere09 17383096 17385933 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1331 156 307 WRKY Transcription Factor Family AT4G12020 28.125 1.09e-06 50.8