Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1326 ATGGCGGCAAACTTAAGCAATCACTTTGACTGCAATGGGCCAGAATTCACATGCTGCCATACTTGGTATTCACCAGAAACAGGGATTTATTGTAGCAAGCACGCTCCCTTGGAGCTTCCTTCAGATCCTTTTCTTGATGTTGTTTCTTTTATTTTTTCTCACCAACACAATGGGGTTTCAGCTCTTATTGATTCTTCATCTGGGTGTTCAATTTCTTACTCAGAATTGTTTCCTTTGGTCAAATCCGTAGCATCTGGTCTCCATAGAATGGGCGTTTCACAAGGTGACGTTGTTCTACTTTTAATTCCTAATAGCATTTACTATCCCATTGTTTTCATGGGTGTTTTGTATCTTGGCGCCATTGTTACACCAATGAATCCTCTTAGTAGCATCCCAGAAATCCGTAGGCAAATTGCTGACTGTGGTGTGAGTGTGGCTTTTTCTGTACAAGAAAAAGTTCGGAAACTACAACCATTGGGCATTCCAATTATTGGGGTGCCAGAAAATCTGAAGGATTTGAAACACTCTGGTTTCTCAACTTTCTATGACCTTGTTTCTGTTAACTTCGATTTGTTTCCGAGGCCAGCAGTTAAACAAGAAGACAAGGCGGCTATAATGTATTCGTCCGGGACTACGGGTGTGAGCAAAGGAGTTATTCTAACACATAAGAATTTTATTTCTATGGTTGAGCTTTTTGTGAAGTTTGAAGCTTCTCAATATGAATATTCAAGCTTGAAGAATGTGTTTCTAGCTGTTCTGCCAATGTTCCATATATATGGTTTATCACTCTTCGCAACAGGATTACTGTCTTTAGGCTCTACAGTTATTGTAATGAGAAAATTTGACATCAATGAGGTGATCAAGGTGATTGATAAGTACAAAGTTACACACTTTCCTGTTGTTCCACCTATGTTGACAGCATTGACAAAAAGGGTAAAGGGTATAAATAGGAGTTATCTGCAGAGTTTGATACAGGTCTCCTGTGGTGCAGCACCTTTGAGCAGAAAAACTATAGAGGACTTTGTGCTTACTCTCCCTAATGTTGACTTTATACAGGGTTATGGAATGACTGAGTCGACTGCAGTAGGAACACGTGGCTTCAATACTGAAAAGTTTCGAAATTATTCTTCAATAGGATTGTTAGCTCCCAACGTGGAAGCTAAAGTGGTTGATTGGAATACTGGTGCCTTTTTGCCTCCAGGCAGTAGTGGTGAGCTATGGTTGAGGGGGCCTTCAATAATGACAGGATACTTGAATAACGAAGAAGCCACAATGTCAACAATTGATAGAGAAGGTTGGCTACACACTGGAGATATTGTTTGGTTTGATCAAGATGGATATTTACATATATCTGACCGTTTGAAAGATATTATCAAATACAAGGGCTATCAGATTGCTCCTGCTGATTTAGAAGCTGTGTTAATTTCTCATCCTGAGGTAGTTGATGTAGCTGTTGCAGGTGCAAATGATGAAGAAACAGGGGAGATGCCAGTGGCATTTGTGATCAGGAAGGTTGGATGTGCACTCTCTCAGGAAACTCTTCTGGAATATGTTGCTCAGCAGGTTGCTCCATACAAGAAGGTGAGGAAAGTGGTGTTCACTGACACAATACCAAGGTCAGCTGCTGGAAAGATTCTTAGAAGGCAACTGAGGAACTGCTTGACATCTAAACTTTGA 1677 0.4055 MAANLSNHFDCNGPEFTCCHTWYSPETGIYCSKHAPLELPSDPFLDVVSFIFSHQHNGVSALIDSSSGCSISYSELFPLVKSVASGLHRMGVSQGDVVLLLIPNSIYYPIVFMGVLYLGAIVTPMNPLSSIPEIRRQIADCGVSVAFSVQEKVRKLQPLGIPIIGVPENLKDLKHSGFSTFYDLVSVNFDLFPRPAVKQEDKAAIMYSSGTTGVSKGVILTHKNFISMVELFVKFEASQYEYSSLKNVFLAVLPMFHIYGLSLFATGLLSLGSTVIVMRKFDINEVIKVIDKYKVTHFPVVPPMLTALTKRVKGINRSYLQSLIQVSCGAAPLSRKTIEDFVLTLPNVDFIQGYGMTESTAVGTRGFNTEKFRNYSSIGLLAPNVEAKVVDWNTGAFLPPGSSGELWLRGPSIMTGYLNNEEATMSTIDREGWLHTGDIVWFDQDGYLHISDRLKDIIKYKGYQIAPADLEAVLISHPEVVDVAVAGANDEETGEMPVAFVIRKVGCALSQETLLEYVAQQVAPYKKVRKVVFTDTIPRSAAGKILRRQLRNCLTSKL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1326 558 Gene3D - 456 556 IPR045851 -
Dere09g1326 558 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 24 552 - -
Dere09g1326 558 FunFam Long-chain-fatty-acid--CoA ligase FadD 32 455 - -
Dere09g1326 558 Pfam AMP-binding enzyme C-terminal domain 470 544 IPR025110 -
Dere09g1326 558 Pfam AMP-binding enzyme 55 460 IPR000873 -
Dere09g1326 558 SUPERFAMILY Acetyl-CoA synthetase-like 56 555 - -
Dere09g1326 558 CDD 4CL 39 550 - -
Dere09g1326 558 FunFam 4-coumarate--CoA ligase 2 456 557 - -
Dere09g1326 558 Gene3D - 29 455 IPR042099 -
Dere09g1326 558 ProSitePatterns Putative AMP-binding domain signature. 205 216 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1326 Dere-ChrDere09 17341036 17345243 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1326 22 558 Monolignol Biosynthesis Gene Families AT4G19010 59.740 0.0 679