Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1321 ATGGGAGCCAGGGAAAACCCGTTGGTATATGTTCACTTTCTCACCATCGTCATCGCCGTGGTTTGCACACTGGTGACTTCCGATAGTCCAGTCGTCACTAAAAATGTGACGGCAACGGTAACAGTCCCTTCCGGGAGAGCAGCCATAAACAATGCGACGCCATCAGGACAAGGAACTCCCGCGAGTGCGGAGACAGACACTCTGAAGCAATCAGACACACTAAACTCCACCCAATACCTGGTTTCCGACAACAAGAATTTCACCTTTGGATTCCGCAAACCTTTCGTCTCCAATAACAACACTTACTTAGCCATCTGGTATTCCGATGGGTCATCGCATCCAGTCTGGATAGCCAACAGAGACACCCCCATCATTGATGATTCAGGAATGCTCGTTAACCACAGCACCGGAAAGCTTGTGATCAATCGAGCTGATGGGAACCCAATTCAACTGTGCCCTGGGCAAGCCAGTGCCAACAACACCAACGCGACCGCCGTTCTGCAAAACAATGGAAATCTAGTGCTAAGAGAAGTGAATTCCGATGGATCTGACGGCAGGACCCTGTGGCAAAGCTTTGATTGTCCCTCCGACACTCTTTTGCCGGGAATGAAGTTAGGCGTGAATCACAGAACAGGGAGGAATTGGTCACTCACCTCATGGCTGGCTTTAGATGACCCATCTCCCGGAGCCTTCACTCTGGAATGGGACCCCAATGGTCTGGAGTTGGTTCTTCGGCGACGAGGGTTGGTTTTTTGGACTAGTGGGGTCTTGAAAAACGACACCATTGATGGTGTAGAGACCTTTGAATACATGATGGAGGACTCCAATCTGATACAGTATTATCATATGATATCCACTAGAACTTCAAACGAGGAGTTCTTCAGTTATTCCTTGAAACACGACCCAAGATTTCTCAATTATCACACAACTATGGCATGGCTGATAGATGAGACGGGAACTTTTTCCTTTAATGGTATAGGAATCCCATTACAGGATAGATGTTATGGCTACAACACAGACAGGGGATGTGCAAAATGGACGCAGCCAGAGTGCAGGAGTGATAAAACAACGTTTGAGTTACTGTCTGGGGGCTTCTTTAAGTCTGATGGAGGCGTTTTGCTTGGTCATCTCAATGAAAGCATTGGCCCTGCCGATTGTAGACTCAGCTGCTGGAATGATTGTGATTGTCAAGCATACCAGCATAGCACAAGGCTGGGTTGCACCACACACCGCCAAAAAGAAAAGTTTCAAGCAGACCCATCCGGGACTTCACCACAATTTTATGTTATCCGACGACCACAAAACAGAAGGAAGAACATCAGGAAATGGATCGCAATTTCAGTTTCTATCACTCTGTTGTTTGCATCTCTCATTGTCATTATTTTCTGTCTGAGATGGAAAAGAAAAGGGAGAAAAGAGGACCACCTACGTCAGTTGATGAAACCAGCTGGTACATTACACAATGCAAATGAGCTTGAATATGATAATAACTTGGCTCAAAATTTGAAAATCTTCAGCTTTGCATCTATGGTTGAAGCTACAAGCAATTTTTCTGCAAAAAATAAGCTTGGTGAGGGTGGCTTTGGCCCAGTATATAAGGGAAAATTGCCTGAAGGGCTAGAAATTGCAGTAAAGAGGCTATCAAGAAGTTCAGGACAAGGAATAGTGGAGTTTAAGAATGAGCTAATACTCATAGTAAAACTACAACACATGAATCTTGTTCGTCTGCTAGGCTGCTCCATACAAGGCGAGGAGAAGATGTTGGTTTATGAATACATGCCCAACAAGAGCTTGGACTCCTTTCTCTTTGATGCATCCAAGAGGGGTGTACTGGACTGGAAGAAACGAGTAATGATTATTGAAGGAATTTCACAAGGACTTTTGTACCTTCATCAGCACTCAAGCGGGTATATGTCTCCTGAGTATGCAATGGAGGGCATATTCTCTGTAAAATCAGATGTTTTCAGTTTTGGAGTTTTGATCCTTGAAATTTTAAGCGGCAAGAGGAACAGTAGCTTTTATGATCTCAATGGACCTTTAAATTTGGTTGGACATGCTTGGGAGCTGTGGCAAAGAGGAGATGGGCTAAAGCTAATGGATCCATTATTAAGTGATTCATGTTCCACACAACAATTTCTTAGATTTATTCAAGTAGGTCTTTTGTGTGTGGAAGATTCTCCGGCAGATAGACCAACTATCTCAGAAGTCCTTTCTATGATCACACATGAAAACACTTATTTGCCTATGGTGAAGAAACCTGCATTTATGAATTTGGACAGCATTGCCAATGCAGACTCTCAAAGGAATAACTTAGAATATTATTCCGTGAACGGTGCTTCTATTTCTACTTTGAATGGAAGATAA 2364 0.4387 MGARENPLVYVHFLTIVIAVVCTLVTSDSPVVTKNVTATVTVPSGRAAINNATPSGQGTPASAETDTLKQSDTLNSTQYLVSDNKNFTFGFRKPFVSNNNTYLAIWYSDGSSHPVWIANRDTPIIDDSGMLVNHSTGKLVINRADGNPIQLCPGQASANNTNATAVLQNNGNLVLREVNSDGSDGRTLWQSFDCPSDTLLPGMKLGVNHRTGRNWSLTSWLALDDPSPGAFTLEWDPNGLELVLRRRGLVFWTSGVLKNDTIDGVETFEYMMEDSNLIQYYHMISTRTSNEEFFSYSLKHDPRFLNYHTTMAWLIDETGTFSFNGIGIPLQDRCYGYNTDRGCAKWTQPECRSDKTTFELLSGGFFKSDGGVLLGHLNESIGPADCRLSCWNDCDCQAYQHSTRLGCTTHRQKEKFQADPSGTSPQFYVIRRPQNRRKNIRKWIAISVSITLLFASLIVIIFCLRWKRKGRKEDHLRQLMKPAGTLHNANELEYDNNLAQNLKIFSFASMVEATSNFSAKNKLGEGGFGPVYKGKLPEGLEIAVKRLSRSSGQGIVEFKNELILIVKLQHMNLVRLLGCSIQGEEKMLVYEYMPNKSLDSFLFDASKRGVLDWKKRVMIIEGISQGLLYLHQHSSGYMSPEYAMEGIFSVKSDVFSFGVLILEILSGKRNSSFYDLNGPLNLVGHAWELWQRGDGLKLMDPLLSDSCSTQQFLRFIQVGLLCVEDSPADRPTISEVLSMITHENTYLPMVKKPAFMNLDSIANADSQRNNLEYYSVNGASISTLNGR 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1321 787 Gene3D Transferase(Phosphotransferase) domain 1 633 752 - -
Dere09g1321 787 Pfam D-mannose binding lectin 115 220 IPR001480 -
Dere09g1321 787 ProSiteProfiles Protein kinase domain profile. 517 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1321 787 Gene3D - 61 193 IPR036426 -
Dere09g1321 787 ProSiteProfiles Bulb-type lectin domain profile. 65 188 IPR001480 -
Dere09g1321 787 Pfam Protein tyrosine and serine/threonine kinase 636 736 IPR001245 GO:0004672|GO:0006468
Dere09g1321 787 Pfam Protein tyrosine and serine/threonine kinase 519 633 IPR001245 GO:0004672|GO:0006468
Dere09g1321 787 PIRSF SRK 634 787 IPR024171 GO:0004674
Dere09g1321 787 PIRSF SRK 328 636 IPR024171 GO:0004674
Dere09g1321 787 PIRSF SRK 55 320 IPR024171 GO:0004674
Dere09g1321 787 SMART blect_4 65 195 IPR001480 -
Dere09g1321 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 114 225 IPR036426 -
Dere09g1321 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 483 592 - -
Dere09g1321 787 Gene3D Phosphorylase Kinase; domain 1 491 592 - -
Dere09g1321 787 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 731 - -
Dere09g1321 787 CDD B_lectin 71 195 IPR001480 -
Dere09g1321 787 SUPERFAMILY Protein kinase-like (PK-like) 499 756 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1321 Dere-ChrDere09 17174978 17178838 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1321 444 755 Receptor kinase-like Gene Family AT4G23230 42.105 6.73e-90 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere09g1321 PK_Tyr_Ser-Thr 3.9e-18 CL0016