Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1309 ATGAGCGTTCCGCCGCTGATGTGGACGGGACCCCAGCCGCCGCCGTTCACGGTGGCGCAGTATCAGGAGCTCGAACACCAAGCCCTCATCTTTAAGTATCTCAAAGCCGGATTATCCGTTCCGCCTGACCTCCTCGCTCCGATTCGTAAGAGCCTCCAATTGATGTCGGTTCATCATTCAGCTCTGGGTTATTGCTCCTATTACGGGAAGAAGATAGATCCAGAACCGGGAAGGTGCAGGAGGACAGATGGCAAGAAATGGAGGTGTTCCAGAGATGCACATCCTGACTCTAAGTACTGTGAGCGGCACATGATTCGCCGCCGATACCGTTCAAGAAAGCCTGTGGAATCATCACAAGCTGCTCTTCCTCCTACTCAGTCTTCGGACGTTGGTGGTGGGAGCAGAAGTAGTTGTGGAAGCTCATTCCAGACCCTGCCCTTGCATACAAATGGTACTCGTGAGGGTTTAAGCCTTGGAAGCAATGTATCGCAGCTGCAGATTGAGCCTCTTTCCAGTGAGATTAACAAGAAAGAGTACAGGTTCGGACTACACTCTGAAGTAGATGAACATGACTTCTTACAAAAGGATATGGGAAGTGTGAGGTATCTTGGTTTTGACTCTACTTCAGATGGCATGTGGTCTCAGTTGTCTCAGATCTCCTCAAATCCTGTCTCTGAATCAAGTAATAGTTCTGTTATGGCTGGCAACTGCTTTCAACTGCGAGCAATGCAAGATGCTGAGCCATCGAACATTGATGCTGCAAGGTCCAAGCAACATGTCTTCAGTGGTCAGTTAGGTTCTGCTGGTTGTTTGAAACAGGAATATCAGGCCCCTCAGACTCTCTTTGGTGGCTGGCCATGGAAGAAGGATATTGGCTCCCCTGCCATGGAGTATAGACCTAATAAGGATTCTAACAGCAACCCAGATGTCAACGTTGATTGCTGTGGATCTTTATAA 957 0.489 MSVPPLMWTGPQPPPFTVAQYQELEHQALIFKYLKAGLSVPPDLLAPIRKSLQLMSVHHSALGYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRYRSRKPVESSQAALPPTQSSDVGGGSRSSCGSSFQTLPLHTNGTREGLSLGSNVSQLQIEPLSSEINKKEYRFGLHSEVDEHDFLQKDMGSVRYLGFDSTSDGMWSQLSQISSNPVSESSNSSVMAGNCFQLRAMQDAEPSNIDAARSKQHVFSGQLGSAGCLKQEYQAPQTLFGGWPWKKDIGSPAMEYRPNKDSNSNPDVNVDCCGSL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1309 318 Pfam QLQ 15 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere09g1309 318 MobiDBLite consensus disorder prediction 110 144 - -
Dere09g1309 318 SMART QLQ_2 14 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere09g1309 318 PANTHER GROWTH-REGULATING FACTOR 5 14 215 IPR031137 GO:0005634|GO:0006351|GO:0032502
Dere09g1309 318 MobiDBLite consensus disorder prediction 118 144 - -
Dere09g1309 318 ProSiteProfiles QLQ domain profile. 15 50 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dere09g1309 318 ProSiteProfiles WRC domain profile. 73 117 IPR014977 -
Dere09g1309 318 Pfam WRC 74 116 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1309 Dere-ChrDere09 17050836 17053476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1309 14 119 GRF Transcription Factor Family AT3G13960 58.407 1.46e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dere09g1309 WRC 1.2e-19 No_clan