Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1306 ATGGAGACTTCAAGCTCTCTTTTACAATTGGAGCAGATACAAGGTAAAGGAAGGGGTTTGATTGCAGCTCAGAATCTCAAGGCCGGCCAAATCGTCCTCCGAGAATCCCCCATCATTCTCTACTCTACTTTTCCTCTTTTCTCTGAATCCTCATCTTACTGTGACCACTGCTTCAGAATCTTACCACCACCACCAGTACCCGATGACACTATTTTTACATGCCCCTCTTGTTCCCACCATCGTTTCTGTAGCCAGAAATGCCTCTCCATTGCTCTCAAATCCTCTCACTCTTCATGGGTATGCCAAGCTCTGTCCCATCTGCGAGACTCTGGCTCAGTACTACTTCAACAATCCCAAGAACTTCAAGTCCAAGCTCGGTTCGTTGTGGCTGTCAATAACCTTTCCCGTCTTTCGTCTTCCAAAATTCTGATCTTGCTTTCTCTTATGGGTACCCCAGATGAAGCCATTGTTAAAGCTTCGACCTTTCTTCATTCTCTTATTTCTTCTCTCTGCCCACCTCAGAACCAGCTCTCTGTAGAACTCACTGCTCAACTTCTGGCTAAAGATAGGCTCAATTCTTTCTGCTTAATGGAGCCTTATTCCCCAGACGGCCCTCAGAGATCTATCAAAGCATATGCTATTTACCCAGAAGCCACTTTCTTTAACCATGATTGTCTCCCCAATGCCTGCAGATTCGATTATGTCGATACTAGTGCTCCCGGAGATGAACACAACACCGACATTATCTTCAGGATGATTCAGGATGTTCCTCAGGGGAAAGAAGTCTGCATAAGCTATTTCAGAATCAACAGGGATTATTCTACCAGGAAGAGGATTTTGATGGAAGATTATGGGTTTGTTTGTGAGTGTGATAGGTGCAAGATTGAAGCCAATTGGGTTGTTGATGATGAAGAACATGGTACTAGTAATTTCCCTCACGCGTGGTTTCTTTTGAAATATGTGTGTGATAGAAAGAACTGTTCAGGCACACTGGCTTCTCTGCCTCCAAAGGATGATGAAGCACCATCTAATGTTCTGGAATGTAATTTCTGTGGCAATTTGAAAGTTGATGCTTAG 1077 0.4401 METSSSLLQLEQIQGKGRGLIAAQNLKAGQIVLRESPIILYSTFPLFSESSSYCDHCFRILPPPPVPDDTIFTCPSCSHHRFCSQKCLSIALKSSHSSWVCQALSHLRDSGSVLLQQSQELQVQARFVVAVNNLSRLSSSKILILLSLMGTPDEAIVKASTFLHSLISSLCPPQNQLSVELTAQLLAKDRLNSFCLMEPYSPDGPQRSIKAYAIYPEATFFNHDCLPNACRFDYVDTSAPGDEHNTDIIFRMIQDVPQGKEVCISYFRINRDYSTRKRILMEDYGFVCECDRCKIEANWVVDDEEHGTSNFPHAWFLLKYVCDRKNCSGTLASLPPKDDEAPSNVLECNFCGNLKVDA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1306 358 Gene3D - 116 193 - -
Dere09g1306 358 Pfam SET domain 17 266 IPR001214 GO:0005515
Dere09g1306 358 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 302 357 IPR044238 -
Dere09g1306 358 ProSiteProfiles SET domain profile. 1 267 IPR001214 GO:0005515
Dere09g1306 358 SUPERFAMILY SET domain 8 294 IPR046341 -
Dere09g1306 358 CDD SET_SMYD 191 293 - -
Dere09g1306 358 SMART set_7 6 273 IPR001214 GO:0005515
Dere09g1306 358 Gene3D - 53 110 - -
Dere09g1306 358 Gene3D SET domain 19 294 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1306 Dere-ChrDere09 17041534 17042610 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere09g1306 SET 1.1e-12 No_clan