Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1304 ATGTTTACGTGCATAGCATGTACGAAGCAAACAGCGGATGACAGGGAGGAAGAAGAAGGAGGACGTGAGAGTGGCACGCCCAGCACAAAAGAAGCCGTCAAAGGCCTGACGGCGCAGATAAAAGATATGTTCATTAAGCAATGCAAACCCTGCACAGGGTCCAGTAGCTACAAGAAAGGGCAGAGACATTTTCCAGACTTCGATACAATATCTGAAGGGGTTCCATACCCTTATATTGGAGGGGCAAGTTCAAGTTCAACTCCTGCATGGGACTTTACAAGCTCCCATTACCCAGGCGGTAGATCTGACCCAAGATTTGGTGGGGCAGGACGTGACTCAACGGTATCAGCCCAATCTTGTGATGTGGTTTTAGAGGAGGAGGATGAGCCCAAGGAGTGGATGGCTCAGGTGGAACCTGGTGTTCACATTACGTTTGTGTCTCTTCCTAATGGAGGGAATGATCTCAAAAGAATTCGCTTCAGCCGAGAAATGTTCAATAAATGGCAAGCTCAGAGATGGTGGGGTGAGAATTATGACCGGATCATGGAGCTCTATAACGTCCAGAGATTCAATCGACAAGCTTTTCAAACTCCCTCGAGGGCTGAGGACGAGCCAAGAGATTCTTCATACACAAGATTAGGATCTGCACGAGAGAGCAAGGAGTGGACACCGAGGCACCACTATAAACCCTCGGGAAACAGAGGATTCTGCCCTTCTGATAATTTTGATCAGGGTGGTGGCCACCAGTTCCATGCAGGGTCATCCATGGAACCACCACGGCCAACTACTGATTCTATAAATGAACCTTCTGTCAGCAATGCCAGTGAGATGGAGGCAGAATGGATAGAAGAGGATGAGCCTGGGGTCTACATTACAATACGACAATTAGCTGATGGTACAAGGGAGCTCCGGCGTGTCAGATTCAGCCGTGAAAGATTTGGAGAAGTAAATGCAAAGACATGGTGGGAGGAGAACAGAGAGAGAATACAAGCTCAATACCTTTGA 1005 0.4816 MFTCIACTKQTADDREEEEGGRESGTPSTKEAVKGLTAQIKDMFIKQCKPCTGSSSYKKGQRHFPDFDTISEGVPYPYIGGASSSSTPAWDFTSSHYPGGRSDPRFGGAGRDSTVSAQSCDVVLEEEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQAFQTPSRAEDEPRDSSYTRLGSARESKEWTPRHHYKPSGNRGFCPSDNFDQGGGHQFHAGSSMEPPRPTTDSINEPSVSNASEMEAEWIEEDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1304 334 MobiDBLite consensus disorder prediction 195 276 - -
Dere09g1304 334 Pfam Transcription factor regulating root and shoot growth via Pin3 278 333 IPR013591 -
Dere09g1304 334 Pfam Transcription factor regulating root and shoot growth via Pin3 131 185 IPR013591 -
Dere09g1304 334 MobiDBLite consensus disorder prediction 10 32 - -
Dere09g1304 334 ProSiteProfiles BRX domain profile. 131 186 IPR013591 -
Dere09g1304 334 MobiDBLite consensus disorder prediction 199 228 - -
Dere09g1304 334 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 334 IPR044532 -
Dere09g1304 334 MobiDBLite consensus disorder prediction 256 274 - -
Dere09g1304 334 ProSiteProfiles BRX domain profile. 279 334 IPR013591 -
Dere09g1304 334 MobiDBLite consensus disorder prediction 10 25 - -
Dere09g1304 334 Pfam Transcription factor BRX N-terminal domain 24 51 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1304 Dere-ChrDere09 17025266 17030201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1304 1 334 Major Intrinsic Protein MIP AT1G31880 67.898 5.08e-160 449