Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1302 ATGGAGAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTATGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAGATGAAGAAGAAATATTACTCTTGGGAAGAGTGTGTAAATCTGAGAGAGGTCAAGTCATTACGGAAGATGAATCACCCTAATATTGTGAAACTGAAGGAAGTTATTCGAGAATGTGACATTCTGTACTTCGTTTTTGAGTACATGGAATACAACCTGTACCAACTCATGAAAGACAGGACAAAGCTGTTTTCTGAAGGTGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCACAGTCTTGCTTACATGCACCAACGTGGATATTTTCATCGTGACTTGAAGCCAGAAAACTTGCTGGTCACCAAGGACGTTATAAAAGTTGCTGATTTTGGTCTTGCACGTGAGATCAGTTCTCAACCACCCTACACCGAGTATGTGTCTACACGGTGGTATCGAGCACCTGAAGTGCTGCTTCAGTCTTATCTGTATAGTTCTGAAGTTGATATGTGGGCAATGGGTGCCATAATGGCTGAACTGTTCTCTCTCCGTCCTCTTTTTCCAGGTGCCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTGATTGGCAGTCCAACGTTGGAATCATGGGCTGATGGACTTAAACTTGCAAGGGATATCAACTATCAGTTTCCACAGCTTGCTGGCGTAAATCTTTCTAGTCTGATCCCATCAGCAAGCGCTGATGCAATCAACCTTATTACAGCACTTTGCTCTTGGGATCCCTGCAAGAGGCCAACAGCTGCAGAGGCCCTTCAACATCCTTTCTTCCAGGGTTGCTTTTACATTCCTCCTTCCCTCCGCAGTAAAGCAGTAGCCAGAACTCCCCCATCTGCCGGAGCAAGGGGAGCACTGGATCGGCATGGGGTTAAGAGATATTCTGGTGCTTTGTCTAATTCGAAGCAAACAAATAACTTTTCTTCCTCAAAATTACATCCTCCTTTAGCTGCAGGTGTGCAACGCAAATTGGATATGACAAATGAGGATGGGAATAAGACTGAAAAGACCTTGAAGACTATCAAACAACCAAAATATCGACCACCTGGAAAGGAGAGCCCAACTTCAATGAGCAAGGGAAGGGCAGCACGTGGGGTTTCAGAAACTGCAGAGAAGTTGGGTAATATGACTGTTGGTAATCGAAGACAATCCATGGGACAACCCCGACCGCCTCCTCCAATGAAGGCTGGAGTCCAATGGCTTTCTGAATCAAGAAACTTCCTGCTTAGGCCTGCACAAGAGGTTTCGACTGCAAGAACTTACCCTAGAAAAGTTGCCGGATGA 1359 0.443 MERYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRECDILYFVFEYMEYNLYQLMKDRTKLFSEGEVRNWCFQVFHSLAYMHQRGYFHRDLKPENLLVTKDVIKVADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYLYSSEVDMWAMGAIMAELFSLRPLFPGASEADEIYKICSVIGSPTLESWADGLKLARDINYQFPQLAGVNLSSLIPSASADAINLITALCSWDPCKRPTAAEALQHPFFQGCFYIPPSLRSKAVARTPPSAGARGALDRHGVKRYSGALSNSKQTNNFSSSKLHPPLAAGVQRKLDMTNEDGNKTEKTLKTIKQPKYRPPGKESPTSMSKGRAARGVSETAEKLGNMTVGNRRQSMGQPRPPPPMKAGVQWLSESRNFLLRPAQEVSTARTYPRKVAG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1302 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Dere09g1302 452 MobiDBLite consensus disorder prediction 350 422 - -
Dere09g1302 452 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Dere09g1302 452 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Dere09g1302 452 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Dere09g1302 452 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1302 452 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1302 452 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Dere09g1302 452 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1302 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 340 - -
Dere09g1302 452 CDD STKc_MAK_like 4 283 - -
Dere09g1302 452 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
Dere09g1302 452 MobiDBLite consensus disorder prediction 351 371 - -
Dere09g1302 452 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1302 Dere-ChrDere09 17011734 17016630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1302 1 290 Core Cell Cycle Gene Families AT3G48750 37.919 8.16e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Dere09g1302 Pkinase 1.6e-72 CL0016