Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1274 ATGAAATGGCAATGGCCATGGCTTGTTTATGTTCTGCTGATGTGTATTGTAATCAATAAAAACGAGGCGATCAGTCCTGATGGTGAGGCACTTCTCAGTTTCAGGACAGCAGTTGTTAGCTCAGATGGTATCCTGTTACAATGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGCGATCCAAAAACCAAGAGAGTGACATATCTGAGTCTAGCTCGCCACAAGCTGAGTGGATCCATACCGCCTGAGCTGGGGAAGCTAGAGCATCTGACTGTTCTTGCTCTTCACAACAACAATTTCTATGGAACAATTCCATCAGAATTGGGAAACTGCACTGAGTTGCAGAGAATATTCTTGCAGGGCAATTACCTTAGTGGAACAATTCCAAGTGAAATTGGAAACCTTTCGCAGCTTAAAAGTTTGGATATATCAAGTAACTCACTCAGTGGGAATATACCTCCATCACTTGGGAAGTTGTGTAATCTTAAAAGTTTCAATGTTTCAACCAATTTTCTGGTTGGACCAATACCTTCTGATGGCGTGCTTGCTAACTTCACTGAAAACTCCTTTGTTGGAAATCGTGGCTTGTGTGGAGTGCAAATCAATATAACATGTAAAGACGATGGTTCGCCTACAAATCTGCAATCTCCGACCTCAGACCAAGACCAAAATGGAAAGAAGAAATATTCTGGCCGGTTACTTATCAGTGCATCTGCAACTGTGGGTGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGCTTTCTTTATAAAAAGTTTGGTAAAAATGACAGAAAAAGTCTAGCAATGGATGTTGGTGGAGGAGCATCGATTGTGATGTTTCATGGGGATCTTCCATATTCTTCAAAAGACATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATTGGTTGTGGGGGATTTGGAACAGTTTACAAGCTTGCAATGGATGATGGGAATGAATTTGCTTTGAAAAGGATTGTTAAGTTGAATGAGGGCTTTGATCGTTTTTTTGAGCGGGAGCTTGAAATTCTTGGAAGCATAAAACACCGTTATCTTGTAAACTTACGAGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGATTACCTACCTGGGGGTAGTCTTGATGAAGCTCTTCATGAGAAATCTGAGCAGCTAGACTGGGATTCACGGCTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCTTACTTGCACCATGATTGTTCCCCAAGGATCATACACCGTGACATAAAATCAAGCAATATTTTACTTGATGGTAACCTGGATGCTCGAGTCTCTGATTTTGGGCTTGCCAAACTGCTGGAGGATGAAGAATCTCATATCACTACCATTGTTGCTGGAACATTTGGTTATCTAGCCCCAGAGTATATGCAAAGTGGTAGGGCAACTGAAAAGACAGATGTTTATAGTTTTGGTGTATTGGTACTTGAAGTGCTGAGTGGAAAGCGACCAACAGATGCATCATTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTCATTACCGAAAATAGGCAGAGGGAGATTGTTGATCCCCTATGTGAAGGAGTGCAGGTAGAGAGCCTCGATGCCTTGCTCTCTGTAGCTATTCAGTGTGTTTCTTCAAGTCCAGAGGATCGACCAACCATGCACCGAGTGGTCCAGGTGCTTGAATCAGAGGTCATGACCCCTTGCCCAAGTGACTTCTACGACTCCAACTCTGAGTAG 1770 0.422 MKWQWPWLVYVLLMCIVINKNEAISPDGEALLSFRTAVVSSDGILLQWRPEDPDPCKWKGVKCDPKTKRVTYLSLARHKLSGSIPPELGKLEHLTVLALHNNNFYGTIPSELGNCTELQRIFLQGNYLSGTIPSEIGNLSQLKSLDISSNSLSGNIPPSLGKLCNLKSFNVSTNFLVGPIPSDGVLANFTENSFVGNRGLCGVQINITCKDDGSPTNLQSPTSDQDQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRKSLAMDVGGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYKLAMDDGNEFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHEKSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRQREIVDPLCEGVQVESLDALLSVAIQCVSSSPEDRPTMHRVVQVLESEVMTPCPSDFYDSNSE 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1274 589 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 380 582 - -
Dere09g1274 589 Pfam Protein kinase domain 306 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1274 589 ProSiteProfiles Protein kinase domain profile. 304 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1274 589 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 186 - -
Dere09g1274 589 Gene3D Ribonuclease Inhibitor 25 210 IPR032675 -
Dere09g1274 589 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 71 572 - -
Dere09g1274 589 Gene3D Transferase(Phosphotransferase) domain 1 380 578 - -
Dere09g1274 589 SUPERFAMILY L domain-like 25 190 - -
Dere09g1274 589 SUPERFAMILY Protein kinase-like (PK-like) 289 571 IPR011009 -
Dere09g1274 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Dere09g1274 589 Gene3D Phosphorylase Kinase; domain 1 279 379 - -
Dere09g1274 589 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 278 379 - -
Dere09g1274 589 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Dere09g1274 589 ProSitePatterns Protein kinases ATP-binding region signature. 310 336 IPR017441 GO:0005524
Dere09g1274 589 SMART serkin_6 304 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1274 Dere-ChrDere09 16680878 16690460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1274 1 580 Receptor kinase-like Gene Family AT2G35620 77.586 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Dere09g1274 Pkinase 2.2e-46 CL0016