Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1271 ATGAAGCAGCCATCGAAGCCATGGAGGCCATTCACGGCAAATTGCTGCTCGACGAAGGACCAAACCATCTGGGGCAACTTCAGCCGATGCAAGCCGACGTCGCGTTCGGATTTGTCGAAGGATGTTGCTCCGTTACCGTCGTTTCGGAGGCTGTCGTTCTCGGATCTGAGCCGGTCGTCGTCGGCGCGAATCAACGAGGACCTGGCGCAATCGTTCGGGTCGGATCTGCACGATTTTCAGCTGAGCGAGCTGCGAGCCATAACGCAGAATTTCTCGAGCAATTTCTTGTTGGGGGAAGGCGGGTTCGGGACGGTGCATAAGGGCTATATCGATGACAGCATGAGGCACGGCTTAAAGGCTCAGCCCGTCGCCGTCAAGCTTCTCGACATTGAAGGCTTACAAGGACATCGTGAATGGCTTGCAGAAGTAATATTTCTTGGGCAGCTAAGGCACCCCAACTTGGTGAAGTTGATTGGGTATTGCTGTGAGGAAGAAGAACGGCTCCTTGTCTACGAATTCATGCCAAGAGGAAGCTTGGAGAATCACTTGTTCAGAAGGATAACATCATTGCCATGGGGCACCAGGTTAAAAATTGCAATAGGTGCAGCTAAAGGCCTCTCCTTCTTGCATGGAGCAGAGAAGCCAGTCATATACAGGGACTTCAAAACTTCCAATGTCTTGCTTGATTCAGATTTCACAGCTAAATTGTCAGATTTTGGATTAGCAAAAATGGGGCCAGAGGGATCTAACACACACGTCACAACCAGAGTCATGGGCACCTATGGATACGCAGCCCCAGAATACGTCTCAACAGGTCACTTAACCACAAAAAGTGATGTGTATAGCTTTGGGGTAGTCCTGCTAGAACTACTCACAGGAAGAAGGGCAATGGAGAAGACAAGACCAAAGACTGAGCAAAACCTTGTGGACTGGTCAAGACCTTACTTGAGTAACAGTAGGAAGTTGAGGTATATTATGGATCCAAGATTTGCAGGCCAGTATTCTGTAAAGGGTGCAAAGGAGATGGCTCGTTTGGCACAGCAATGCATAAGTATGAATCCTAAAGACAGGCCAAGGACGCCAGCCATTGTCGAAACTCTTGAAAACTTGCAGCAGTTCAAGGACATGGCTATTACCTCTGGACACTGGCCTGCTTCCTCAAAATCTAGGAATGGAGCTTCCAATAAGGTCAAACTTGATATCAGAGCTGGTGCAAACCACAGGAAGCCCTCTCCTGTAGTTTCAAGCAAAAAAACTTGA 1260 0.4873 MKQPSKPWRPFTANCCSTKDQTIWGNFSRCKPTSRSDLSKDVAPLPSFRRLSFSDLSRSSSARINEDLAQSFGSDLHDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYIDDSMRHGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEEEERLLVYEFMPRGSLENHLFRRITSLPWGTRLKIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSNTHVTTRVMGTYGYAAPEYVSTGHLTTKSDVYSFGVVLLELLTGRRAMEKTRPKTEQNLVDWSRPYLSNSRKLRYIMDPRFAGQYSVKGAKEMARLAQQCISMNPKDRPRTPAIVETLENLQQFKDMAITSGHWPASSKSRNGASNKVKLDIRAGANHRKPSPVVSSKKT 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1271 419 SUPERFAMILY Protein kinase-like (PK-like) 72 368 IPR011009 -
Dere09g1271 419 PANTHER OS01G0588500 PROTEIN-RELATED 61 371 - -
Dere09g1271 419 FunFam Serine/threonine-protein kinase PBS1 174 382 - -
Dere09g1271 419 ProSiteProfiles Protein kinase domain profile. 91 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1271 419 Pfam Protein tyrosine and serine/threonine kinase 97 367 IPR001245 GO:0004672|GO:0006468
Dere09g1271 419 ProSitePatterns Protein kinases ATP-binding region signature. 97 126 IPR017441 GO:0005524
Dere09g1271 419 Gene3D Transferase(Phosphotransferase) domain 1 174 383 - -
Dere09g1271 419 MobiDBLite consensus disorder prediction 381 419 - -
Dere09g1271 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Dere09g1271 419 CDD STKc_IRAK 97 370 - -
Dere09g1271 419 Gene3D Phosphorylase Kinase; domain 1 53 173 - -
Dere09g1271 419 FunFam Serine/threonine-protein kinase BIK1 57 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1271 Dere-ChrDere09 16661028 16664372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1271 79 383 Glycoside Hydrolase AT3G07070 49.838 8.86e-100 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dere09g1271 PK_Tyr_Ser-Thr 2.1e-47 CL0016