Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1266 ATGATTACCTGTTGTGACTCAGTGCGGTTATTCTCGAGCCTCAAGAACCGGACATTGTTCCAGTACATCAGCTGGTTGGGCATCTCATTCAGCATTTTCTCATTCAGAATCTGCAGAATGGAGAGTACAAGAGTAGGTCAGGCTTTGAAACTGAATCTTCTAGTATGTGTACTGATATTGTTGAAGGCAGAAGGCTTCTTTGTACCAATCACTTATGTTGAGAATGCAGTAGCAAAAGGAGCTGTTTGTTTGGATGGGAGCCCCCCAGCTTACCACTTTGACAAGGGTTTTGGATCAGGGATTAACAACTGGCTTATTCACATTGAGGGAGGAGGGTGGTGCAACAATGCCACTACATGCCTTTCCCGAAAGAGCACTCGCTTAGGTTCATCTAAGCAAATGGTCAAGCAGATTGCCTTCTCTGGACTTCTAAGTAACAAGCCACAGTTTAATCCTGATTTCTACAATTGGAACAGAATCAAGGTTAGATACTGTGACGGTGCATCATTCACCGGTGATGTGGAAGCAGTGGATTCACGCACCAATTTGCACTTCAGAGGAGCAAGAGTTTTTGTTGCTGTCATTGAGGACCTACTAGTAAAAGGAATGAATAATGCTGAAAATGCTATTCTCTCTGGTTGTTCAGCTGGAGGGTTGACTTCTATATTGCATTGTGATCGCTTTCGAGCCCTTATACCTACTGGTGCTAAAGTGAAATGCCTTTCAGATGCTGGTTACTTTATTAATGCAAAGGATGTCTCAGGAGCACAACACATTGAACAATTTTACAGTCAAGTTGTTGAAACACATGGATCGGCAAAAAATTTACCTCAATCCTGCACTTCAAGACTCAGCCCAGGGCTTTGCTTTTTCCCACAATATGTGGCATCACAAATCAGTACACCAATTTTCTTTGTAAACGCAGCTTATGACTCATGGCAGATAAAGAACATTTTGGCACCGGGTGTTGCTGATCCCCATGGCCGCTGGCATAGCTGCAAGCTTGATATAAACAACTGCTCAACTGATCAACTCAGCGTAATGCAAGGCTTCAGGTTGGACTTTTTGAGGGCATTGAATGTGCTAGGAAACTCTTCGTCTAAAGGCATGTTTATAGACTCCTGCTATGCACACTGCCAAACCGAAATGCAGGAGACATGGTTAAGAAGTGACTCTCCATTGCTGAGCAAAAAAACAATTGCAAAGGCAGTAGGAGACTGGTATTTTGAGCGAAGTCCATTCCATCAGATCGATTGCCCTTACCCTTGCAACCCCACTTGTCATAACCGCGTATTCGAGCCAGACCATCCAGGAGTATAG 1320 0.4386 MITCCDSVRLFSSLKNRTLFQYISWLGISFSIFSFRICRMESTRVGQALKLNLLVCVLILLKAEGFFVPITYVENAVAKGAVCLDGSPPAYHFDKGFGSGINNWLIHIEGGGWCNNATTCLSRKSTRLGSSKQMVKQIAFSGLLSNKPQFNPDFYNWNRIKVRYCDGASFTGDVEAVDSRTNLHFRGARVFVAVIEDLLVKGMNNAENAILSGCSAGGLTSILHCDRFRALIPTGAKVKCLSDAGYFINAKDVSGAQHIEQFYSQVVETHGSAKNLPQSCTSRLSPGLCFFPQYVASQISTPIFFVNAAYDSWQIKNILAPGVADPHGRWHSCKLDINNCSTDQLSVMQGFRLDFLRALNVLGNSSSKGMFIDSCYAHCQTEMQETWLRSDSPLLSKKTIAKAVGDWYFERSPFHQIDCPYPCNPTCHNRVFEPDHPGV 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1266 439 PANTHER NOTUM-RELATED 54 429 IPR004963 GO:0016787
Dere09g1266 439 Pfam Pectinacetylesterase 62 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1266 Dere-ChrDere09 16609643 16615742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1266 54 439 Carbohydrate Esterase AT4G19420 64.218 0.0 585
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1266 09 16609643 16615742 Dere09g1266 09 16609643 16615742 ECH