Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1263 ATGGAGTACAATAATTTAGGAAGTGGTTCAGATAATGACTTGGATTTCTTGACATCTTTGACAAATTGCACCAAATTGCAGGTGCTGGATCTAAATTTGAATAACTTTGGAGGTTCTTTACCCAACTCTGTAGCCAATTTGTCAAGTAAATTAAGTCAGTTCTATATAGGTGGCAATCAGATTTCTGGGACTATACCTGAAGGATTAGAGAATCTCATTAACTTGATTGCCTTGGACTTGGAGTTCAACCATCTCACTGGGTCCATTCCAGCTTCTTTTGGGAAGTTTCAGATGATGCAATCATTGACCTTTTCACATAACAACCTTAGTGGAGCTATTCCTTCGGATGTTATTGGTCTGCCCTCATTATCATTGTTACTCAACTTATCTCAGAACTCATTTAATGGCAGCCTACCCATTGAGGTTGGCAACCTTAAAAGCATCAGTAAGTTGGATGTTTCTAGAAATGCTCTGTCTGGAAACAGTGAACTTTGTGGGGATATCACAGTGCTACATCTCCCACAATGCCCTGCGGAAGTTGGTGTCATCCATTGGAAAAGAAAATTAAACAGAAGATATTCTTCTACTTTGCCCACAATGGACCAAAGCCAACTTTCCAAGGTCTTATATCAGACACTGCACCAGGCAACTAGTGGGTTCTCTCCAAGTAAGTTGATAGGATCTGGTGCTTTTGGCTTTGTATACAGAGGAACTTTTGAGTCAGAAGGTAGGGTTGTTGCTATAAAGGTTCTAAACCTTCAAAAGAAGGGAGCTCATAAAACTTTTTTCACTGAATGCAATGCACTCAGAAATATACGGCATAGGAATCTGGTTAAGATTATAACATGTTGCTCTAGTATGGATTACAAAGGCGGTGAATTTAAAGCTCTAATTTTTGAGTACATGGAAAATGGAAGAATAGAGAAATGGTTGCATCCAGAGCCAGATAGTGAAGATCAGTCAAGAACTTTAGACCTTCTTCAAAGACTAAATATTTTCATTGATGTTGCTTCCGCTCTAATGTATCTTCACTATGAACATGAGCAGCAAATTGTTCACTAGTATGGAACAGGAGGTGAAGTTTCAACGCAAGGTGATGTGTATAGTTTTGGAATTCTTGTGTTGGAAATGCTCACTGGAAGGAGACCCACAGATGAACTGTTTACAGATGGTTTTAATCTCCATAATTATGTCAAGACTGCCTTGCCAGATAAACTATTACAGATAGTGCACCCAGCTCTTCTCCTTAGAGAATTGAAACAAACAGCATCACCAGCAGAAGAAGAAAACCACATGAATGATCAGAAGTTGAGTCAGATGCATCTAGAGAAGTGCCTACTTGAACTTTCTTACATCGGACTAACTTGTTCAGCTGAATCACCCAAAGAAAGAATGAATATGAGGGATGTCACCAGGGAACTAGATCTAATCAGAAGTGCTTTCCTTGCTGGTAGAAAAATGGAGACTGACACTAGTATTAAAGTTCAGAGGCGACACCGAACACTACCAATACTACTGGTTTAG 1524 0.3937 MEYNNLGSGSDNDLDFLTSLTNCTKLQVLDLNLNNFGGSLPNSVANLSSKLSQFYIGGNQISGTIPEGLENLINLIALDLEFNHLTGSIPASFGKFQMMQSLTFSHNNLSGAIPSDVIGLPSLSLLLNLSQNSFNGSLPIEVGNLKSISKLDVSRNALSGNSELCGDITVLHLPQCPAEVGVIHWKRKLNRRYSSTLPTMDQSQLSKVLYQTLHQATSGFSPSKLIGSGAFGFVYRGTFESEGRVVAIKVLNLQKKGAHKTFFTECNALRNIRHRNLVKIITCCSSMDYKGGEFKALIFEYMENGRIEKWLHPEPDSEDQSRTLDLLQRLNIFIDVASALMYLHYEHEQQIVHXYGTGGEVSTQGDVYSFGILVLEMLTGRRPTDELFTDGFNLHNYVKTALPDKLLQIVHPALLLRELKQTASPAEEENHMNDQKLSQMHLEKCLLELSYIGLTCSAESPKERMNMRDVTRELDLIRSAFLAGRKMETDTSIKVQRRHRTLPILLV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1263 507 Gene3D Transferase(Phosphotransferase) domain 1 302 354 - -
Dere09g1263 507 Gene3D Phosphorylase Kinase; domain 1 203 301 - -
Dere09g1263 507 Gene3D Ribonuclease Inhibitor 3 202 IPR032675 -
Dere09g1263 507 PANTHER OS04G0122200 PROTEIN 355 472 - -
Dere09g1263 507 FunFam Leucine-rich repeat receptor protein kinase EMS1 17 116 - -
Dere09g1263 507 ProSiteProfiles Protein kinase domain profile. 220 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1263 507 SUPERFAMILY Protein kinase-like (PK-like) 193 474 IPR011009 -
Dere09g1263 507 Gene3D Transferase(Phosphotransferase) domain 1 355 498 - -
Dere09g1263 507 Pfam Protein tyrosine and serine/threonine kinase 224 353 IPR001245 GO:0004672|GO:0006468
Dere09g1263 507 SUPERFAMILY L domain-like 11 164 - -
Dere09g1263 507 ProSitePatterns Protein kinases ATP-binding region signature. 226 249 IPR017441 GO:0005524
Dere09g1263 507 FunFam LRR receptor-like serine/threonine-protein kinase EFR 191 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1263 Dere-ChrDere09 16583921 16586228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1263 22 486 Receptor kinase-like Gene Family AT3G47570 33.670 4.81e-89 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Dere09g1263 PK_Tyr_Ser-Thr 9.9e-19 CL0016