Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1258 ATGTCCTATCTTGAGTCAATGTGCTTGCGGTATATATCCATATCCATGGCTCTAGTTACCAGTTCTCCCAGTGTGTTCTCTACGAGGCACCGTGAGCCAGAACTGGTGGTGCCTGCAAAACCAACCCCACATGAGACGAAGCTGCTATCTGACATAGACGACCAAGAAGGCCTTCGATTTCAGCTTCCTGTAATGATATTCTACAGAGACGACCCTTTAATGGAGGGAAAAGACCCTGCTTTGGTGATCAAGGAAGCTATAGCTGAAGCACTGGTGTATTACTACCCTTTTGCAGGTAGGCTCAGAGAAGGGCCTAACAGAAAGCTCATGGTGGATTGTAATGGAGAAGGAGTGTTGTTCGTTGAAGCCGATGCTGCCATTTCCCTCATGCATCTTGGCCACACAATTCTGCCACCATGTCCTTATACGAAGCAGTTCCTGCGTGAGGTTCCTGGGTCTGAAGCCATTCTCGGAAGCCCCCTGTTGTTGGTTCAGGTGACTCGTCTTGCATGCGGAGGATTTGTGTTAGCCATTCGCATGAATCACACAATCTGCGACACACTTGGCCTCGTCCAATTTCTGAGAATGGTCTCTGAATTTGCAACACACTCTCCGATCTCCCAATTCCCTGTTTGGCAAAGACAACTATTATCTGCGCGAGACCCTCCTCGCATCACTTGCCTCCACCACGAATACCATGAATCCAATTCACAACCCAACCCAGAAACGACGCTTTCCGATTCCGAGGACCAAACGGTCCACTGCTCTTTCTTCTTCGCCCCCAAACACATCCTCTCAATCCGCAATCGTCTCCCTTTTCATCTTAGAAAATGCTCCACCTTCGAGCTGCTCACAGCATGTTTGTGGAAATGCCGCACTGAAGCACTTGATATGAAACCCAGCGAGATTGTGGCCATTTCACCCTTTATCACAGCTCGAGGCAAACAAAACCTAGAATTGCCCGATGGGTATTACGGAAATGCCTTTGCGTTCCCAACTGCGATATCGGAAGCTGGGTTGCTACGCGAAAACCCATTGGGGTATGCGTTGGAGTTGATCAGAGAGGCTAAGGCACAAATGAACAAAGAGTACATGAGCTCTGTGGCTGATCTTATGGCTGTCAAGGGGCGTCCCATGTATAGGAGGACTGGGAATTATCTTGTGGCTGACACGACCCGTGTGGGGTTTCAGAGTGTGGATTTTGGGTGGGGAAAAGCAGTGTATGGTGGGCCGGCAGGGGCTATACCTTATGTTAGCTTCTATGCTGGGTTTAAAAATGAGAAGGGTGAGGATTGCATTGTGGTGCCGATATTGCTGCTGCGGAATACCATGAAGAGGTTCGTTTCTGAGCTGGTGAGGATGACAAGTGAGAAGGGTGTGGATGAGTCTTATGAGGATAGTATGGCCATGCCAATTAGATCAATGTTGTAA 1431 0.4885 MSYLESMCLRYISISMALVTSSPSVFSTRHREPELVVPAKPTPHETKLLSDIDDQEGLRFQLPVMIFYRDDPLMEGKDPALVIKEAIAEALVYYYPFAGRLREGPNRKLMVDCNGEGVLFVEADAAISLMHLGHTILPPCPYTKQFLREVPGSEAILGSPLLLVQVTRLACGGFVLAIRMNHTICDTLGLVQFLRMVSEFATHSPISQFPVWQRQLLSARDPPRITCLHHEYHESNSQPNPETTLSDSEDQTVHCSFFFAPKHILSIRNRLPFHLRKCSTFELLTACLWKCRTEALDMKPSEIVAISPFITARGKQNLELPDGYYGNAFAFPTAISEAGLLRENPLGYALELIREAKAQMNKEYMSSVADLMAVKGRPMYRRTGNYLVADTTRVGFQSVDFGWGKAVYGGPAGAIPYVSFYAGFKNEKGEDCIVVPILLLRNTMKRFVSELVRMTSEKGVDESYEDSMAMPIRSML 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1258 476 Gene3D - 232 450 IPR023213 -
Dere09g1258 476 Gene3D - 29 231 IPR023213 -
Dere09g1258 476 Pfam Transferase family 32 450 - -
Dere09g1258 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 34 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1258 Dere-ChrDere09 16543424 16546003 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1258 31 447 Monolignol Biosynthesis Gene Families AT5G48930 29.508 1.48e-48 171