Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1257 ATGCAATATATATCCATATCCATGGCTCTAGTTACAAGTTCTCCCAGTGTGTTCTCTACGAGGCACCGTGAGCCAGAACTGGTGGTGCCTGCAAAACCAACCCCACATGAGACGAAGCTGCTATCTGACATAGACGACCAAGAAGGCCTTCGATTTCAGCTTCCTGTAATGATATTCTACAGAGACGACCCTTTAATGGAGGGAAAAGACCCTGCTTTGGTGATCAAGGAAGCTATAGCTGAAGCACTGGTGTATTACTACCCTTTTGCAGGTAGGCTCAGAGAAGGGCCTAACAGAAAGCTCTGGTGGATTTTCCTGCGTGAGGTTCCTGGGTCTGAAGCCAATCTTGGAAGCCCTCTGTTGTTGATTCAGTTGACTCGTCTTGCATGCGGAGGATTTGTGTTAGCCATTCGCATGAATCACACAATCTGCGACACACTTGGCCTCGTCCAGTTTCTGAGAATGGGCTCTGAATTTGCAACACACTCTCCGATCTCCCAATTCCCTGTTTGGCAAAGACAACTATTATCTGCCCGAGACCCTCCTTACATCACTGGCCTCCACCACGAATACCATGAACCCATTTCACATTCCAACGCAGAGACGACGCATTCTGATTCCGACGACCAAACAGTCCACTACTCTTTCTTCTTCAGCCCTAAACACGTCCTCTCAGTCCGCAATTGTCTCCCTTTTCACCTTCGAGAATGCTCCACCTTCGAGCAGCTCTCAGCGTGTTTGTGGAAATGCCGCACTGAAGCACTTGATATGAAACCCAGCGAGATTGTGGCCATTCCACCCTTTATCACAGCTCGAGGCAAACAAAACCTAGAATTGCCTGATGGGTATTACGGAAATGCCTTTGCGTTCCCAACTGCGATATCGGAAGCTGGGTTGCTACGCGAAAACCCATTGGGGAGGACTGGGAATTATATTGTGGCTGACACGACCCGTGTGGGGTTTCAGAGTGTGGATTTTGGGTGGGGAAAAGCAGTGTATGGTGGGCCTGCAGGGGCTATACCTTATGTTAGCTTCTATGCGGGGTTTAAAAATGAGAAGGGTGAGGATTGCATTGTGGTGCCGACATTGCTGCTGCGGAATACCATGAAGAGGTTCGTTTCTGAGCTGGTGAGGATGACAAGTGAGAAGGGTGTGGATGAGTCTTATGAGGATAGTATGGCCATGCTAATTAGATCAATGTTGTAA 1206 0.4859 MQYISISMALVTSSPSVFSTRHREPELVVPAKPTPHETKLLSDIDDQEGLRFQLPVMIFYRDDPLMEGKDPALVIKEAIAEALVYYYPFAGRLREGPNRKLWWIFLREVPGSEANLGSPLLLIQLTRLACGGFVLAIRMNHTICDTLGLVQFLRMGSEFATHSPISQFPVWQRQLLSARDPPYITGLHHEYHEPISHSNAETTHSDSDDQTVHYSFFFSPKHVLSVRNCLPFHLRECSTFEQLSACLWKCRTEALDMKPSEIVAIPPFITARGKQNLELPDGYYGNAFAFPTAISEAGLLRENPLGRTGNYIVADTTRVGFQSVDFGWGKAVYGGPAGAIPYVSFYAGFKNEKGEDCIVVPTLLLRNTMKRFVSELVRMTSEKGVDESYEDSMAMLIRSML 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1257 401 Gene3D - 102 192 IPR023213 -
Dere09g1257 401 Gene3D - 21 101 IPR023213 -
Dere09g1257 401 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 26 300 - -
Dere09g1257 401 Pfam Transferase family 24 100 - -
Dere09g1257 401 Pfam Transferase family 309 375 - -
Dere09g1257 401 Pfam Transferase family 118 308 - -
Dere09g1257 401 Gene3D - 309 379 IPR023213 -
Dere09g1257 401 Gene3D - 193 308 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1257 Dere-ChrDere09 16535708 16537846 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1257 23 372 Monolignol Biosynthesis Gene Families AT5G48930 23.888 5.74e-22 95.5