Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1240 ATGCCACAAAACTCCATAGCACCAAAACCAGAATATTGCAGCAGTAACCCTGTAGAAGAAGGAGCACAAGAGATGACAGAGCCCCATAACTCAACCGTTCTTGCCTACCCCGTACAAACCAATGAACAATCTTTACCAAAACTGAATTTGTACCCAATAACTCTGAAGTTTGAGGAACTGGTATATAAAGTTAAACTAGAGCAGGGAGGATCGTGTTGGGGTAGTTCATGGAGTTCCAGAGAGAAGACCATATTGAATGGGATTACAGGTATGGTTTGCCCAGGAGAAATACTGGCCATGCTGGGCCCCTCAGGCAGTGGGAAGACCACACTTCTTACAGCTCTTGGAGGCCGTCTAAGTGGTAAATCATCTGGGAAGATCACATACAACAATCAGCCTTTCTCAGGTGCCATAAAAAGAAGAACCGGGTTTGTAGCTCAGGATGATGTTCTATACCCTCATCTGACTGTTTTTGAGACTCTTGTGTTCACTGCACTTTTAAGGCTGCCTAACAGCTTGACCAGAGATGAAAAAGTTGAGCATGTAGAGCGAGTTATCGCTGAGTTGGGACTGACTCGGTGCAGGGGAAGCATGATAGGAGGCCCACTTTTCAGAGGAATATCAGGTGGAGAGAAAAAGCGGGTGAGCATAGGTCAGGAAATGCTCATTAATCCAAGCCTTTTGTTGCTAGATGAGCCCACCTCAGGTTTGGACTCGACCACAGCTCAGAGGATCCTAAACACAGTCAAACGTCTGGCTAGTGGAGGTAGAACTGTTGTCACCACCATACACCAGCCCTCTAGTCGTCTCTACTACATGTTCGATAAGGTGGTCTTGCTCTCTGAAGGCTGCCCCATCTATAACGGTCCTGCTTCTACAGCCTTGGAGTACTTTTCATCCATTGGTTTTTCCACGTCCATGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAATGGGATTGCCCCGGACTCCAAGAATGCAACTGAACAAAGTGAGAGCCTGGAGCAAGAAAGGAAGCAGGTGAGGGAAGCTCTCATTTCTGCTTATGACAAGAACATAGCCACAAGGTTGAAAGCTGAGCTTTGCAGCTTAAATGTGAACAACTACAACATCACAAAAGATGCTTCTGCAAAAAATGACATAAGACCAGAGCAATGGTGCACAAGCTGGTGGTACCAGTTCAAGGTCCTGTTACAAAGGGGGTTGAGGGAGCGAAGGTATGAAGCTTTCAACAGACTGAGAATATTCCAAGTCATAAGTGTCGCTTTTCTTGGTGGACTCTTGTGGTGGCATACACCAGAATCGCACATTGAAGACCGGATAGCCTTGCTCTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTCTTCACATTTCCTCAAGAAAGAAGAATGCTGATCAAGGAACGGTCATCAGGAATGTACCGCCTTTCATCCTACTTTCTAGCTAGAACGATAGGAGACATGCCACTGGAGCTTGCTCTACCAACTGCATTTGTCTTCATAATATACTGGATGGGAGGGCTTAAACCTCACCCTGTGACTTTCATTCTTTCCCTTCTTGTGGTTCTTTACAGTGTTCTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGTGCCATTCTTATGGAGATCAAACAGGCCACTACTTTAGCTTCTGTCACAACCCTTGTATTTCTCATTGCTGGAGGATACTACATACAACAGATCCCTCCCTTCATAGTGTGGTTCAAGTACTTAAGCTATAGCTACTATTGTTACAAACTTCTTCTTGGTGTCCAGTACAATGAAGATGATGTTTATGAGTGCTCAAAGGGTGTCTTGTGCAGGGTTGGAGATTTTCCTCCCATCAAATCAATGGGCTTGAATCATCTGTGGATTGATGTGGCCATTATGGCTTTGATGTTGGTAGGTTATCGCCTAGTTGCATATATAGCCCTCCATAGAGTGAGGTAG 1971 0.4521 MPQNSIAPKPEYCSSNPVEEGAQEMTEPHNSTVLAYPVQTNEQSLPKLNLYPITLKFEELVYKVKLEQGGSCWGSSWSSREKTILNGITGMVCPGEILAMLGPSGSGKTTLLTALGGRLSGKSSGKITYNNQPFSGAIKRRTGFVAQDDVLYPHLTVFETLVFTALLRLPNSLTRDEKVEHVERVIAELGLTRCRGSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTVKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYNGPASTALEYFSSIGFSTSMTVNPADLLLDLANGIAPDSKNATEQSESLEQERKQVREALISAYDKNIATRLKAELCSLNVNNYNITKDASAKNDIRPEQWCTSWWYQFKVLLQRGLRERRYEAFNRLRIFQVISVAFLGGLLWWHTPESHIEDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDMPLELALPTAFVFIIYWMGGLKPHPVTFILSLLVVLYSVLVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYIQQIPPFIVWFKYLSYSYYCYKLLLGVQYNEDDVYECSKGVLCRVGDFPPIKSMGLNHLWIDVAIMALMLVGYRLVAYIALHRVR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1240 656 CDD ABCG_EPDR 52 289 - -
Dere09g1240 656 Gene3D - 74 301 IPR027417 -
Dere09g1240 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 301 IPR027417 -
Dere09g1240 656 MobiDBLite consensus disorder prediction 1 29 - -
Dere09g1240 656 Coils Coil 326 353 - -
Dere09g1240 656 Pfam ABC-2 type transporter 264 342 IPR043926 GO:0140359
Dere09g1240 656 FunFam ABC transporter G family member 22 72 301 - -
Dere09g1240 656 ProSitePatterns ABC transporters family signature. 207 221 IPR017871 GO:0005524|GO:0016887
Dere09g1240 656 Pfam ABC transporter 85 235 IPR003439 GO:0005524
Dere09g1240 656 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 55 307 IPR003439 GO:0005524
Dere09g1240 656 Pfam ABC-2 type transporter 394 600 IPR013525 GO:0016020|GO:0140359
Dere09g1240 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 33 649 - -
Dere09g1240 656 SMART AAA_5 94 284 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1240 Dere-ChrDere09 16278898 16281658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1240 76 283 Calmodulin-binding Proteins AT2G36910 30.455 7.78e-13 70.1