Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1238 ATGGCAGGAGCAGGGGGAGACATATGGAAGGCCCATTTGGCTATGGTGCTTACGCAGCAATTCTATGGAGGCTACCATGTAATCACTAAATTGGCTCTCAACGACGGGATCAACCAGTCTGTCTTCTGCGTCTTCCGCGATCTTATTGCTGTTGTTATCCTTGCTCCCATCGCTATTATTCGTGAAAAACAGATGCGACCACCCTTGACTATGCACCTCTTGATGTCTTTCTTCTTTCTTGGATTAACCGGGATTTTTGGCAACCAGATTTTGTTTCTTCTTGGTTTAAGCTATACTAATCCAACATATGCTGCTGCCACACAACCAACCATTCCAGTCTTTACACTTCTCTTGAGTATGATGATGGGTATAGAAAGAGTGAACTTGCTCAGATATGAAGGTGTAGCAAAGGTTGGAGGAGCTTTTGTCTGTGTTTCTGGTGCCATATTTATGGCTTTGTTTCGTGGTCCGGCACTACTAGGTTACACAGGAATGGATAATATAGTCCACAGTGAAATAAGTGCCAAAGGTCAACCTGAGCCGACTGGATGGTTAATTGGCAGTTTGCTGGGCTTTCAGTTCAACCGATTTCACATTGGGCTTCTGTGCTTGATGGGGAACTGCATATGCATGGCTGCTTTTATTGCAGTTCAGGCTCCTGTATTAATAAAGTATCCTGCCAACACATCTATCACAGCATTTTCGTACTTATTTGGAGTTTTGCCAATGGTGATAACAGCATTCTTCACAACTAATGAGTCGACAGATTGGAGTTTGACACAGTCTGAAATATTGGCTGTTATTTATGCTGGAACAATTACATCTGCCCTTTGCTATGGACTCTTGACATGGTCCAATAAGATCTTGGGGCCTGCTATGGTTGCCCTTTATTTTCCACTACAGCCCGCAGCTTCCACCCTCCTGTCACTAATTTTTATTGGAAGTCCATTATATTTGGGGAGTGTCATAGGGGGATCTTTAATTATTGCCGGGCTATATCTGGTTACTTGGGCATCTTATAGAGAAAGACTGGCAACTCTTGGGGTCGTTCCTCCTGATCCTCGTGTCTCTTGGGTCTCTGAACCACTTATTCCCGGAGATGGTCTGCTTGACAGGAATTCATACCCAAGAGTTCTATCATCGAAACCTTCAGATTAA 1158 0.4387 MAGAGGDIWKAHLAMVLTQQFYGGYHVITKLALNDGINQSVFCVFRDLIAVVILAPIAIIREKQMRPPLTMHLLMSFFFLGLTGIFGNQILFLLGLSYTNPTYAAATQPTIPVFTLLLSMMMGIERVNLLRYEGVAKVGGAFVCVSGAIFMALFRGPALLGYTGMDNIVHSEISAKGQPEPTGWLIGSLLGFQFNRFHIGLLCLMGNCICMAAFIAVQAPVLIKYPANTSITAFSYLFGVLPMVITAFFTTNESTDWSLTQSEILAVIYAGTITSALCYGLLTWSNKILGPAMVALYFPLQPAASTLLSLIFIGSPLYLGSVIGGSLIIAGLYLVTWASYRERLATLGVVPPDPRVSWVSEPLIPGDGLLDRNSYPRVLSSKPSD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1238 385 PANTHER WAT1-RELATED PROTEIN 13 343 IPR030184 GO:0016020|GO:0022857
Dere09g1238 385 Pfam EamA-like transporter family 11 136 IPR000620 GO:0016020
Dere09g1238 385 Pfam EamA-like transporter family 199 336 IPR000620 GO:0016020
Dere09g1238 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 145 - -
Dere09g1238 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1238 Dere-ChrDere09 16241839 16248178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1238 94 367 Nodulin-like Gene Family AT5G45370 62.590 1.67e-116 338