Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1231 ATGCCACCATTCATGGCCCAAAGCGAAAGGACAAACAGATCTTCCTTTAGCTCTAGCAATGGCAATGAGGATACTCCTGTACACAACTATGCTACAATCAGCAATGGCGATGACTATGATAGTGATAGCTCCAATTTTGCACCACTTACACCAGCATCTCTATCAGTGGCTATTCCAGCAGAACTTGCTGGAGCTGTACCCTTAATTGACAGATTCCAGGTGGATGGATTTTTAAGATTAATGCAGAAACAAATTCAATCTGCTGGGAAACGTGGATTTTTTTCTAAAAGATCTGCAGGCTCTCAAGTCAGAGAGAAATTTACATTTGAGGATATGATGTGTTTCCAAAAGGATCCAATACCAACATCATTGCTTAAAATTAATGGTGATTTGGTAAGCCGGGCAACAAAATTATTCCAGATAATTTTGAAATACATGGGGGTTGATTCATCTGATCATGGAAATCCATTAAGCCTAGATGAACGAGTTGAGCTTGTAGGGAAACTATACAAGCACTGTTTGAAGCGGTTGGAACTCCGAGATGAAATTTTTGTTCAAATATCAAAACAAACAAGAAATAATCCCGAAAGATCATACTTAATTAAAGCATGGGAGCTAATGTATTTATGTGCCTCCTCCATGCCTCCTAGTAAAGACATTGGAGGATACCTGTCAGAATATGTTCATAATGTAATAAATGGTGTGAGTATTGATTCTGAGATTCAAGCTCTTGCATTAAATACATTAACTGCTTTGAAGCGCTCTGTCAAGGCTGGTCCCAGGCATATAGTACCTGGGCGTGAGGAGATTGAAGCTCTGTTAACTGGGAGAAATCTTACAACCATAGTGTTTTTCCTGGATGAAACTTTTGAAGAAATTACATATGACATGTCAACAACAGTTGCTGATGCTGTTGAGGAGCTTGCAGGGATCATCAAGCTGTCAGCATACTCTAGCTTTACTCTCTTTGAATGCCGTAAATTTGTTACTGGCTCCAAATCACCTGATCCTGGGACTGAGGAGTGCATTGGATTAGATGATAACAAATATATTGGCGATCTCCTGGAGGAATTTAAGGCAGCAAAAGATCGAAGCAAGGGAGAAATTTTGCACTGTAAACTGATATTCAAGAAAAAGCTTTTTCGGGAGTCAGATGAAGCTGTAGCAGATCCAATGTTTGTGCAATTGTCCTATGTACAGTTGCAACATGATTATATTTTGGGTAATTATCCTGTTGGAAGGGATGATGCTGCCCAACTATCAGCATTGCAAATCGTAGCTGAGATTGGATTAGTAAGTGCACCTGAATCATGCACTGACTGGAATTCACTTCTGGAGAGATTCCTACCTAGGCAAATTGCAATCACAAGAGCAAAACGGGAATTGGAGTTGGACATCCTTTCTCGATATCGTTTGTTGGAACATCTGACAAAAGATGATGCAAGACAGCAATTCCTACGCATATTGAGAACACTTCCTTATGGGAATTCAATCTTTTTCAACGTTCGGAAGATTGATGATCCTATTGGACTTTTGCCAGGGCGAATAGTATTGGGCATTAATAAGAGAGGGGTTCATTTTTTTCGTCCAGTACCAAAAGAATATCTGCACTCAGCTGAGTTAAGAGACATAATGCAATTCGGAAGTAGCAATACTGCAGTGTTTTTTAAAATGCGAGTTGCAGGCATGCTTCACATATTCCAGTTTGAAACCAAGCAGGGCGAAGAAATTTGTGTAGCTCTTCAGACACATATAAATGATGTAATGTTGCGCCGTTATTCCAAAGTACGATCTGCTGCTAGTGGTTCTGTGAATGGTGTAAACGGAGATCTCTCTAACAATGTTAAGCCTTCCAATCTGGAGTTGCATGAGAAGCGTGTTCAAGATTTATCAAAAATAGTTGAAAAATCTCAAAGAAAAGCTGATCAATTGCTGGAAGAATTGCGTGAAAAACAAAAGCAAGAAGAGAAAATGCAAGAAGAATTGCAGGGCTTGAAAGAATCTTTAAAGGCTGGTAAACAAAGTCTTCTGGAAGTTTCAAGTGATCGTGATAGGCTTAAATCATTATGCAATGAAAAAGACCAGGAATTTCAGGCTGCTATTACAGAGAAAAGGAACATGGAAGCAAGGTTGGGCAAGTTGAGTGATCTGATGATTGAGAATGCTACCGAAAAAGATTCTATTGGAGCAAATAACCAAGTGTTACAAAAAGTTGAAGATGAGCTAAAACTTAGTGGAGATAAGCTGCATGCAGCGGAAGAAATTATCAAAAGAGTAACAAACGAAAATTTGGTCTTGGAAAGGAGGTTAACAGAGCTTGAGAACAGAAATGCCAATGAGATCAATTTTCTTGAACGTGAATTTGAGCAAGAACGCAAAGACCTGAAATCTCAAGTGCATGACCTTGGAAAGAAGCTTGAAGGGATTAGACAAGAATTAGTGGCTGTTGAGTTTACTCTGTCAATCAAGGACTCTGAGTTGACTGCGGTGCAGAGTAATTTAAAGGAGCTGGAGGAACTCAGAGAAATGAAAGAGGACATTGATAGAAAGAATGAACAAACAGCTGCCATATTGAAGATGCAAGCGGCTCAACTAGCTGAAATGGAATTACTTTACAAGGAAGAACAGCTTCTGAGGAAGCGTTACTTTAACACCATAGAAGACATGAAAGGCAAGATTAGAGTTTACTGTCGGCTGCGACCTCTTAGCGAAAAAGAGATTGCTTGGAACGAAAGAGATGTTCTTACTTGTATTGATGAGTTTACAGTTGAACATCCATGGAGGGATGATAAACCAAAGCAGCACATGTATGATCGTGTCTTTGATGGTGATGCCACCCAAGAAGATGTATTTGAGGATACAAGGTATTTGGTGCAATCTGCAGTAGATGGTTATAATGTCTGCATATTTGCTTATGGTCAAACTGGATCTGGAAAGACATTTACAATCTATGGATCTGAAAACAACGCTGGGCTTACCCCACGAGCAACTGCAGAGCTTTTCAAAATTTTAAGGAGAGATACTAACAAATTTTCCTTTTCCTTAAAGGCATACATGGTGGAACTATATCAAGATACACTTATAGATCTCCTTTTACCTATGAATTCGAAGCGTTTAAAATTGGATATCAAGAAGGATTCAAAGGGTATGGTAGCTGTGGAAAATGCAACAGTTGTTTCAATTACCACCATGGAGGAATTGAATAACATAATACAAAGAGGATCTGAACGGCGGCATACATCTGGAACACAAATGAATGAAGAGAGCTCCAGATCCCATCTTATATTATCAGTTGTAATTGAAAGTACCAACCTTCAAAGCCAAGCAATTGCAAGAGGAAAGCTAAGTTTTGTGGATCTTGCCGGCTCAGAAAGAGTGAAGAAATCAGGCTCCTCAGGTAGTCAACTTAAAGAAGCTCAAAGCATCAACAAGTCGTTATCCGCCCTTGGGGATGTTATCAGTGCTTTGTCTTCTGGTGCCCAACACATACCTTATAGGAACCACAAGTTAACTCTGCTGATGAGTGATTCACTTGGTGGCAATGCCAAAACTCTCATGTTTGTGAATGTATCTCCAGCAGAATCAAACTTGGATGAGACATACAATTCTCTTATGTATGCATCGCGGGTGAGATCGATTGTGAATGATCCCAGCAAGAATGTTTCTTCAAAAGAGTTGGCAAGATTGAAGAAGTTGGTTGCATATTGGAAGGAGCAAGCAGGCAGAAGGGGTGAGGATGAAGATTTGGAAGATATTCTAGAAGAAAGAGCAACTAGCGAGAGGACAGAAGGCTGCCATCCTAGGCAGTAA 3810 0.3979 MPPFMAQSERTNRSSFSSSNGNEDTPVHNYATISNGDDYDSDSSNFAPLTPASLSVAIPAELAGAVPLIDRFQVDGFLRLMQKQIQSAGKRGFFSKRSAGSQVREKFTFEDMMCFQKDPIPTSLLKINGDLVSRATKLFQIILKYMGVDSSDHGNPLSLDERVELVGKLYKHCLKRLELRDEIFVQISKQTRNNPERSYLIKAWELMYLCASSMPPSKDIGGYLSEYVHNVINGVSIDSEIQALALNTLTALKRSVKAGPRHIVPGREEIEALLTGRNLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSAYSSFTLFECRKFVTGSKSPDPGTEECIGLDDNKYIGDLLEEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVADPMFVQLSYVQLQHDYILGNYPVGRDDAAQLSALQIVAEIGLVSAPESCTDWNSLLERFLPRQIAITRAKRELELDILSRYRLLEHLTKDDARQQFLRILRTLPYGNSIFFNVRKIDDPIGLLPGRIVLGINKRGVHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGMLHIFQFETKQGEEICVALQTHINDVMLRRYSKVRSAASGSVNGVNGDLSNNVKPSNLELHEKRVQDLSKIVEKSQRKADQLLEELREKQKQEEKMQEELQGLKESLKAGKQSLLEVSSDRDRLKSLCNEKDQEFQAAITEKRNMEARLGKLSDLMIENATEKDSIGANNQVLQKVEDELKLSGDKLHAAEEIIKRVTNENLVLERRLTELENRNANEINFLEREFEQERKDLKSQVHDLGKKLEGIRQELVAVEFTLSIKDSELTAVQSNLKELEELREMKEDIDRKNEQTAAILKMQAAQLAEMELLYKEEQLLRKRYFNTIEDMKGKIRVYCRLRPLSEKEIAWNERDVLTCIDEFTVEHPWRDDKPKQHMYDRVFDGDATQEDVFEDTRYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSENNAGLTPRATAELFKILRRDTNKFSFSLKAYMVELYQDTLIDLLLPMNSKRLKLDIKKDSKGMVAVENATVVSITTMEELNNIIQRGSERRHTSGTQMNEESSRSHLILSVVIESTNLQSQAIARGKLSFVDLAGSERVKKSGSSGSQLKEAQSINKSLSALGDVISALSSGAQHIPYRNHKLTLLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLMYASRVRSIVNDPSKNVSSKELARLKKLVAYWKEQAGRRGEDEDLEDILEERATSERTEGCHPRQ 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1231 1269 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856
Dere09g1231 1269 SMART B41_5 275 499 IPR019749 -
Dere09g1231 1269 Pfam FERM central domain 385 497 IPR019748 -
Dere09g1231 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 892 1240 IPR027417 -
Dere09g1231 1269 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 94 276 - -
Dere09g1231 1269 Gene3D - 1216 1263 - -
Dere09g1231 1269 MobiDBLite consensus disorder prediction 1 34 - -
Dere09g1231 1269 Gene3D - 497 605 IPR011993 -
Dere09g1231 1269 MobiDBLite consensus disorder prediction 7 34 - -
Dere09g1231 1269 CDD KISc_C_terminal 890 1215 - -
Dere09g1231 1269 SMART MyTH4_1 115 274 IPR000857 GO:0005856
Dere09g1231 1269 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 497 606 - -
Dere09g1231 1269 FunFam Kinesin-like calmodulin-binding protein 836 1215 - -
Dere09g1231 1269 Gene3D - 278 382 - -
Dere09g1231 1269 SUPERFAMILY Second domain of FERM 377 494 IPR035963 -
Dere09g1231 1269 Coils Coil 781 812 - -
Dere09g1231 1269 Gene3D MyTH4 domain 93 276 IPR038185 -
Dere09g1231 1269 CDD FERM_B-lobe 394 492 IPR019748 -
Dere09g1231 1269 PRINTS Kinesin heavy chain signature 1114 1132 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere09g1231 1269 PRINTS Kinesin heavy chain signature 1163 1184 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere09g1231 1269 PRINTS Kinesin heavy chain signature 964 985 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere09g1231 1269 PRINTS Kinesin heavy chain signature 1083 1100 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere09g1231 1269 ProSiteProfiles FERM domain profile. 279 593 IPR000299 GO:0005856
Dere09g1231 1269 Coils Coil 735 776 - -
Dere09g1231 1269 PANTHER MYOSIN VII, XV 6 152 - -
Dere09g1231 1269 CDD FERM_C_KCBP 496 602 - -
Dere09g1231 1269 Coils Coil 820 857 - -
Dere09g1231 1269 Gene3D Kinesin motor domain 879 1215 IPR036961 -
Dere09g1231 1269 SMART kinesin_4 890 1221 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere09g1231 1269 FunFam Kinesin-like calmodulin-binding protein (ZWICHEL) 278 381 - -
Dere09g1231 1269 MobiDBLite consensus disorder prediction 1240 1269 - -
Dere09g1231 1269 SUPERFAMILY Prismane protein-like 835 896 IPR011254 GO:0003824|GO:0016491
Dere09g1231 1269 ProSiteProfiles MyTH4 domain profile. 115 274 IPR000857 GO:0005856
Dere09g1231 1269 Gene3D - 391 492 IPR014352 -
Dere09g1231 1269 ProSitePatterns Kinesin motor domain signature. 1113 1124 IPR019821 GO:0003777|GO:0005524|GO:0007018
Dere09g1231 1269 ProSiteProfiles Kinesin motor domain profile. 892 1213 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere09g1231 1269 Coils Coil 620 675 - -
Dere09g1231 1269 SUPERFAMILY PH domain-like 499 587 - -
Dere09g1231 1269 Pfam Kinesin motor domain 898 1213 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere09g1231 1269 FunFam Kinesin-like calmodulin binding protein 382 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1231 Dere-ChrDere09 16196999 16205083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1231 30 1257 Calmodulin-binding Proteins AT5G65930 73.463 0.0 1850