Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1226 ATGGGTTCGCGACCGTTGCTCTCCCTCACAACCGCTGCCGTCATTAACATTCTGCTACTCTTCCCGGCGGCGACCTCCCAATCATATATTCAGGACACGCAAAATCACGTCTACGGTCCCTTCAACCCCTCCGACTACCAGACCTTCCACGTCATATCTCCGGCGTCTATCAACAACGGAGCCCTACAAATCACCCCGGACTCCATGGGCAACGTCTCTCGTATTAACACCTCCGGCAGAGTCCTCTTCCCGCAAACATTCAAACTTTGGGACGATCACGGCGACATCAACGGAAAACTTGCTTCCTTCAACACTTCCTTCCTCGTCAACATCTTCCTCGTCAACAACGCCACTCCTGGCGAAGGCCTTGCTTTTGTAATCGCTCCTTCTCTCGACCTTCCCCCAAACAGCCACGGCCAGTTCCTTGGTCTCACGAATTCCACTACCGACGGCAACACCACGAACCAATTCGTCGCAATCGAACTGGACACCGTGAAGCAGGACTTCGACCCGGACGATAATCACATGGGACTTAACATTAATAGTGTTCGATCCAAGGTTAATGTTTCCTTGTCCCAATTTGGATTCCGGATCGCACCAAATGGGACTAGATACTATGTTCTATGGGTGGAATACGACGGTGCACGCAAGGTGCTCGACGTATATATGGCAGAACAATATAACAAGGATGCTCCTATTGTAGCGAAACCCACCAAGCCCGTGTTAAGCTCAGATCTTGATCTTAGACGTATAGTGAAACAGAATTCTTATTTTGGGTTCTCTGCTTCTACGGGAATCACAATTGAGTTGAATTGTGTTCTGAGATGGAATATCTCGGTGGAGAATTTCCCAGATGAGAGAAATACTGGGAGGTTGGTGAAGATTGGTTTGGGTGTTGGGGTGCCTCTGTTGGTTCTGCTTCTGGTGGTTGTTACTGTGTTGGTTTATTATTTATGTAGAAAGAGAAGAAATAAGAAAGCTTCGGATTCGTTAATACTGGGTACGCTCAAGAGTCTTCCTGGAACTCCGAGAGAGTTTGAGTTCAAGGATTTGAAGAAGGCGACGAACAATTTTGATGAGAGGAACAAGCTGGGCCAAGGTGGCTTTGGTGTTGTTTATAGAGGGGCACTGGCGAAGGAGACTTTGGAAATCGCTGTAAAGAAATTCTCGAGGAACAACACGAAAAGCAAAGATGATTTCCTGGCTGAGCTTACAATTATTAACCGTCTCCGTCATAAACATCTTGTCCGGTTACTTGGATGGTGCCACAAGAATGGTGTTCTACTATTGGTATACGAATTCATGCCCAACGGAAGCTTAGACAAACACCTTTTCTGCGAGGAAGCTGGGAGTAGCAGCACAAGCCCTTTAAGTTGGCATGTAAGGTACAAGATAATCTCAGGCGTGGCTTCTGCACTTCATTACCTGCACAACGAGTACGATCAAAAAGTGGTGCACAGAGACCTCAAGGCCAGCAACATCATGCTAGACTCCAACTTCAATGCTCGCTTAGGCGACTTCGGCTTGGCTCGCGCTCTAGAGCACGAGAAAACCTCCTACGCCGAGCTGGAAGGCGTGCCCGGAACCATGGGCTACATCGCCCCGGAGTGCTTCCACACCGGCAAGGCCACCTGCGAGTCCGACGTCTACGGCCTCGGGGCGGTGTTGCTGGAGGTGGCCTGTGGGCAGAGGCCATGGACCCATATCGAGAACTACCAATTCTTGGTGGATTGGGTGTGGTTTCTTCATCGTGAAGGAAGGATATTGGAGGCTGTGGATAGGAGAGTTGGGGATGATTATGTGGCTGAAGAGGCAGAGAGAGTTCTGAAATTGGGACTTGCTTGTTCTCATCCTGTTGCTTCTGAGAGGCCTAAGATGCAGTCCATTGTTCAGATTCTGTCTGGGTCTGTGCCTGTGCCTTATGTTCCTCCTTTCAAGCCTTCTTTTGTGTGGCCTGCGGTTGATTTTGAAAGCTTTGCTTGTGACTTTACTACAACATCATCGACCCTTCAGTCCACACCTATGAACACGCACTCTTCTATGCAAGTTCAATACTCTGATAGCTCTCAACTCTAG 2076 0.4889 MGSRPLLSLTTAAVINILLLFPAATSQSYIQDTQNHVYGPFNPSDYQTFHVISPASINNGALQITPDSMGNVSRINTSGRVLFPQTFKLWDDHGDINGKLASFNTSFLVNIFLVNNATPGEGLAFVIAPSLDLPPNSHGQFLGLTNSTTDGNTTNQFVAIELDTVKQDFDPDDNHMGLNINSVRSKVNVSLSQFGFRIAPNGTRYYVLWVEYDGARKVLDVYMAEQYNKDAPIVAKPTKPVLSSDLDLRRIVKQNSYFGFSASTGITIELNCVLRWNISVENFPDERNTGRLVKIGLGVGVPLLVLLLVVVTVLVYYLCRKRRNKKASDSLILGTLKSLPGTPREFEFKDLKKATNNFDERNKLGQGGFGVVYRGALAKETLEIAVKKFSRNNTKSKDDFLAELTIINRLRHKHLVRLLGWCHKNGVLLLVYEFMPNGSLDKHLFCEEAGSSSTSPLSWHVRYKIISGVASALHYLHNEYDQKVVHRDLKASNIMLDSNFNARLGDFGLARALEHEKTSYAELEGVPGTMGYIAPECFHTGKATCESDVYGLGAVLLEVACGQRPWTHIENYQFLVDWVWFLHREGRILEAVDRRVGDDYVAEEAERVLKLGLACSHPVASERPKMQSIVQILSGSVPVPYVPPFKPSFVWPAVDFESFACDFTTTSSTLQSTPMNTHSSMQVQYSDSSQL 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1226 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Dere09g1226 691 ProSitePatterns Protein kinases ATP-binding region signature. 364 388 IPR017441 GO:0005524
Dere09g1226 691 SMART serkin_6 358 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1226 691 Gene3D Transferase(Phosphotransferase) domain 1 435 638 - -
Dere09g1226 691 Gene3D - 32 293 - -
Dere09g1226 691 CDD lectin_legume_LecRK_Arcelin_ConA 55 277 IPR001220 GO:0030246
Dere09g1226 691 Pfam Protein kinase domain 359 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1226 691 SUPERFAMILY Protein kinase-like (PK-like) 340 673 IPR011009 -
Dere09g1226 691 ProSiteProfiles Protein kinase domain profile. 358 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1226 691 Pfam Legume lectin domain 37 289 IPR001220 GO:0030246
Dere09g1226 691 Gene3D Phosphorylase Kinase; domain 1 343 434 - -
Dere09g1226 691 MobiDBLite consensus disorder prediction 671 691 - -
Dere09g1226 691 FunFam probable L-type lectin-domain containing receptor kinase S.5 435 638 - -
Dere09g1226 691 PANTHER - 62 643 - -
Dere09g1226 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 292 IPR013320 -
Dere09g1226 691 FunFam probable L-type lectin-domain containing receptor kinase S.5 343 434 - -
Dere09g1226 691 CDD STKc_IRAK 364 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1226 Dere-ChrDere09 16170388 16174502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1226 77 664 Receptor kinase-like Gene Family AT5G55830 38.880 3.19e-127 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Dere09g1226 Pkinase 5.6e-48 CL0016