Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1211 ATGCTGGAAGACGATGATAGACTCTGGCTGACAGTGGCAGATGAGGTTGCTTCTTCGGCAATTAAGCAGTACAAGTTCTACATACTGCCTCCTATTGAAGCCTCAACATGTAGCCCTGTCAGAGTTGCCTATCAGATGCACAAGGCATGTACTGCGGATAATCATTTGAGGGATTGTGAATCAGGTTCTCATCTGGCCGAGGGGCATGGTGGATCTGATACTGTAATGGCAAAGGGTCCAGTAAGTGATGAAGATTTATGCTCCCCCTCCATGGGTCACAAGTTTTCTCAAGTTGAAGATTGTGCTTGTCATTCTACAGCTGAACTGTGTAGCAGACCTCAGCCTCATGTTGGAAAGCATGACAGACTTCCTGGGAAAAATTATGTACGGGTAGACCCAAGTTACTTTAAAACTCTTGGTCAGGTTCATTCTGGATGGATATTTGGTGGAATAGCTGAGCTTGTTGATAATTCAAGAGATGCCAAAGCAACCAAGGTGGACATTTTTATAGATATGATAAAGTTGAAGAAATCTGGCAAGGATGAACCTATTCTGTCAGTTATTGATGATGGCCTAGGAATGGAATATGAAGAAATTTTGAAAATGGTTTCTTTTGGGCACAAGCAACCTGATGGGGATAATCCAGATCGCATCGGCAGATTTGGAGTTGGATTCAAGACTGGAGCAATGAGGCTTGGGAATGATGCTCTTGTTTTTACCCAGACTGCTAATTCCAGATGTATAGCTTTCCTTTCACAGTCTTTGAATGAAGGGAAAGAGAATATTGAGATCCCCATAGTTAGTTATCGCCTACGAGGACAGTGTATGGAAGTGGATACAAGTGTTCAGTCTGAAGTTATGGCAAAATGCAATTTGAAAGCGATTCAGGAATTTTCACCATTTAATAAGTATCTTATTGGTGAAAAGGCAGCGTTGTTTGCCGGTGGCACAGGAACACAAATTTACATATGGAACCTCGATAAGTGGGGATCAAATTATTGTTTGCAATGGCATGATGGATTGAAAGGTGGCAGCTCATTCCACCATGGTGACATTTTCATCCGCTCTAGAAGGACCCGTTCTCGCCCAGGCCAAGTCAGTACAAAGGTTCCATTGGATTATTCACTACGATCTTATTTAGAAGTTATCTTCTTAGTTCCACGGATGAAGATAAGCGTTCAACATTCACCGGTTAGAAGTCGACCACTAGGAAATTTTCTTACTAAAACTGTCATTGAAACCAGTTGTGTCTTGGGAAAGCGCGTCCACTTGATTATGGGATTTAGTCAATTGGAGTGGGAGCAGGGAAACTGTGGAACATTTTTGTATTGGCATGGCCGCTTAATTGAGGCTTACAAGAGAGTTGGTGGCATGATTCATAGTGCAGATGTGGGTCGTGGTGTAATTGGTGTCATTGATGTGACTGATTTAATGAATGATGGGGATGGTCGTGTCTGGGTGCATAATAACAAGCAGGGATTCCAGGACTGTGAAGCATATGCACATCTAGAGCAGTGGCTTGGTAGAAAAGCAGATGAATACTGGGACAATAATTTTGATTCACTTAAGCTGGACAATGATAATCGTGTCTACAAACCAGATTGCGAATGGGTACAATGTGACAAGTGCAGGAAATGGAGGATGTTGCCTTATGACTTTGATACCACATTGTTACCGACACAATGGTTCTGTTATATGGAGCCCTTCAAAGGACAGTGTGCAGCTGCTGAACAAAAGATGGAGCATGGTGTCGTCAATGTTTCCACAAAGCGGTCTGGATATGATTGCGTGAAGAAAGATTCTCATTGTAATGAAAAGGTGGACCTTTTGAATGTTTCTAACGCTTCAGGTGACAATTTGGTCGACTGGGGGGATTTCAAACCTCGTGCTTTAAAAAGATTGCGAAGGGGACTGCCTGGAAATGAAGGAGGAGGAGGAGGAGGGTTTTCTTCGTTGTCTCAGGCTGATGATCAGCCAATCCCACCGTTCCAGCCATTTTCTGTTTCGGAGTTGGATCATGATGAAGCAGCAGGTAATAGCAGTAGCTCCTTTGTGTATAATTACAATTCACCCCATTCTCATTTCGTGACCACAATAGCTGCAGACTTTGGCTGCTTTTCTTCTTTCTTCGATTCTCAATTGTCATCGACGACCACGGCACCGACGACGTCGTCTTTTACGGATTATCTACCTTCCCTTGATCAGTTTGGTCCTCTTCCGTCACCTTCTCCTCACGTGTTTCACGCACCACATTCTTGCCCGCTTCCAGAAGCTTCTGGAAAATTGCCCCCCGATGGTGGTGATGGTGCTGCCGCTACACCACCCACAGCGCCGCCTCCTCTCTCTTCCCCACCTGCTGATGTGGTCTGCTTGACTCCACTTTCTGAGGTTCAAGAAGTTGGTGCTGACGTCGGCCCTGCCACCGTACTCGCATCACCTGCACCTGTGCCTGCGCCTTCAGAAATTGAAACGACACAACCTTCTTCTGCAGTCTCCGAAGTGGTTCCGGAGGTGGCGGCTGCTTCTGATGGAGCCACGGTGGCGGCTGCACCGCCTCCTCCACTTCCGCCCAGCAACGAAGCGGTGGCGATTCCTTCTTCCTTGCCCATTAAACGGAAGCGTGGGCGGCCGAGGAAGATTTTTCCGGAGGCTTCCTCCAGTGCTGAACAAGGACGGAGAGCACCTGCACCTGCACCAGCGGAGGCAGCTCCTCAAACCCAAGTGCAGGGGGCTGCTGAGGCATCATGCAAGAGAAAGAGCGATAAGCAGGGAATAGCTTCATCAAGCAAGGGGAAGATGGAGGCGTCTCCTTCGATCCTCATCAACAAAACAAGCAAATCATGGGGTCTCGGTTCAAAAAGAAATGTAATTCAACCAGCTGTTATCATTGACGTATCGGAGCGGATAATGTCCTTCGCAAGAGAAAATGGAGCTGTTTTCATACTAGCAGCAAGTGGAATCTTGTCCTATGTTGAGCTTCTGCAACCCCCGGAATCAGCTGTATCATCGTTTACAGGCAAATTTGATATTCTGACACTGTCAGGGTCACTTCTCATGAGTAAAGATGGCCAGAGCAAATCGGGCTATTTAACAGTGTCAATGACACAGGTTGATGGGAGAGTTGCAGGAGGTCGCGTCCATGGGCGATTGATTGCAGCCTCTCCTATTCAGATAATTGGTGGAATTGTTGCTCCAGCTGATAAGAGGACCTCAAAACCCCTAGAGTTTCAGGCTGATCAGATATTGCAGCTGAATAAGCAGATAAGCTGTATGAACCAAGAGTGGCAAGCTCGGTTGGATGAACAGAAACGAGAGGTTGTGGAGGCGAATAAGCGTCTGGAAACGACTACTAAGGAGCTCAACGAAACAAAACAACAATTGAACGAAACAAAACAACAACTGAACGAAACAAAACAACAATTGAACGAAACAAGACAGCAAGTGGCCACCACTCAGAATATGGTGAAGCAGCTCATTGAACGCTTGAATATTGTGAACCCATCATCAAAGCCCCCTACTGTGTGA 3525 0.4601 MLEDDDRLWLTVADEVASSAIKQYKFYILPPIEASTCSPVRVAYQMHKACTADNHLRDCESGSHLAEGHGGSDTVMAKGPVSDEDLCSPSMGHKFSQVEDCACHSTAELCSRPQPHVGKHDRLPGKNYVRVDPSYFKTLGQVHSGWIFGGIAELVDNSRDAKATKVDIFIDMIKLKKSGKDEPILSVIDDGLGMEYEEILKMVSFGHKQPDGDNPDRIGRFGVGFKTGAMRLGNDALVFTQTANSRCIAFLSQSLNEGKENIEIPIVSYRLRGQCMEVDTSVQSEVMAKCNLKAIQEFSPFNKYLIGEKAALFAGGTGTQIYIWNLDKWGSNYCLQWHDGLKGGSSFHHGDIFIRSRRTRSRPGQVSTKVPLDYSLRSYLEVIFLVPRMKISVQHSPVRSRPLGNFLTKTVIETSCVLGKRVHLIMGFSQLEWEQGNCGTFLYWHGRLIEAYKRVGGMIHSADVGRGVIGVIDVTDLMNDGDGRVWVHNNKQGFQDCEAYAHLEQWLGRKADEYWDNNFDSLKLDNDNRVYKPDCEWVQCDKCRKWRMLPYDFDTTLLPTQWFCYMEPFKGQCAAAEQKMEHGVVNVSTKRSGYDCVKKDSHCNEKVDLLNVSNASGDNLVDWGDFKPRALKRLRRGLPGNEGGGGGGFSSLSQADDQPIPPFQPFSVSELDHDEAAGNSSSSFVYNYNSPHSHFVTTIAADFGCFSSFFDSQLSSTTTAPTTSSFTDYLPSLDQFGPLPSPSPHVFHAPHSCPLPEASGKLPPDGGDGAAATPPTAPPPLSSPPADVVCLTPLSEVQEVGADVGPATVLASPAPVPAPSEIETTQPSSAVSEVVPEVAAASDGATVAAAPPPPLPPSNEAVAIPSSLPIKRKRGRPRKIFPEASSSAEQGRRAPAPAPAEAAPQTQVQGAAEASCKRKSDKQGIASSSKGKMEASPSILINKTSKSWGLGSKRNVIQPAVIIDVSERIMSFARENGAVFILAASGILSYVELLQPPESAVSSFTGKFDILTLSGSLLMSKDGQSKSGYLTVSMTQVDGRVAGGRVHGRLIAASPIQIIGGIVAPADKRTSKPLEFQADQILQLNKQISCMNQEWQARLDEQKREVVEANKRLETTTKELNETKQQLNETKQQLNETKQQLNETRQQVATTQNMVKQLIERLNIVNPSSKPPTV 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1211 1174 Pfam CW-type Zinc Finger 536 578 IPR011124 GO:0008270
Dere09g1211 1174 ProSiteProfiles PPC domain profile profile. 949 1084 IPR005175 -
Dere09g1211 1174 MobiDBLite consensus disorder prediction 635 668 - -
Dere09g1211 1174 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 149 278 IPR036890 -
Dere09g1211 1174 MobiDBLite consensus disorder prediction 741 784 - -
Dere09g1211 1174 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 124 1150 IPR045261 GO:0016887
Dere09g1211 1174 Pfam Morc6 ribosomal protein S5 domain 2-like 374 515 IPR041006 -
Dere09g1211 1174 Gene3D - 523 582 - -
Dere09g1211 1174 Gene3D - 143 301 IPR036890 -
Dere09g1211 1174 ProSiteProfiles Zinc finger CW-type profile. 531 581 IPR011124 GO:0008270
Dere09g1211 1174 MobiDBLite consensus disorder prediction 843 938 - -
Dere09g1211 1174 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 151 270 - -
Dere09g1211 1174 SUPERFAMILY AF0104/ALDC/Ptd012-like 964 1059 - -
Dere09g1211 1174 Coils Coil 1074 1161 - -
Dere09g1211 1174 Gene3D - 963 1080 - -
Dere09g1211 1174 CDD DUF296 964 1059 IPR005175 -
Dere09g1211 1174 Pfam Plants and Prokaryotes Conserved (PCC) domain 964 1059 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1211 Dere-ChrDere09 15967202 15983530 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1211 870 1082 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 31.897 1.55e-20 93.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1211 09 15967202 15983530 Dere09g1211 09 15967202 15983530 ECH