Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1204 ATGGATTCCGCCGTCGAGGGTACGCCTAGGTATTATGGGCTCTGCGCCATTGGAGGAATGCTCAGTGCCGGCACTACCCATCTCGCCACTACTCCTTTTGACGTCTTAAAAGTCAATATGCAGGTGCACCCAATTAAGTATAACAGCATTTCTTCGTCCTTTACTACCATACTAAGAGAACAAGGGCCTTCTGCTCTCTGGAGAGGTTGGGCCGGCAAGTTCTTTGGATATGGTGCTCAAGGAGGCTGCAGATTTGGTCTTTACGAATATTTCAAGGGACTCTATTCCAACGTAATGGGAGACTGTAATAGGAGTTTGGTTTTCCTTCTTAGTAGCGCATCTGCTGAAGTATTTGCTAATATGGCTCTATGCCCATTTGAAGCTGTTAAAGTTAGAGTGCAAGCACAGCCCTGTTTTGCTAAGGGGTTGTTTGATGGCTTTCCAAAGTTATATGCATCGGAAGGCACCCAAGGATTCTACCGTGGGCTTATTCCACTTTGGGGCCGAAACCTTCCGTTTTCCGTGGTTATGTTCTCAACATTTGAGCATTCTGTTGATTTTTTGTATCGTAAAGTTGTTAAAAAAAGAAAAGAGGATTGCTCAATAACTCAACAACTTGGCGTGACATGCTTAGCTGGATATGCAGCTGGATCCATTGGCAGCTTGATTTCTAACCCTGCTGACAATATTGTAGCTTCTCTTTATAACAGAAAGGCTGATAGTCTCATGCTGGCTATCAGGAACATTGGTCTAACCAATCTATTTACCAGGAGCCTCCCCATTAGAGTTATGCTGGTTGGCCCTTCTATAACTTTGCAATGGTTCTTTTATGACACAATTAAAGTTTTAGGTGGATTGCCAACTAGTGGTGAAGTTGCGACTGTCTGGGGAGGAATGGAGGCGGGCTAG 909 0.4455 MDSAVEGTPRYYGLCAIGGMLSAGTTHLATTPFDVLKVNMQVHPIKYNSISSSFTTILREQGPSALWRGWAGKFFGYGAQGGCRFGLYEYFKGLYSNVMGDCNRSLVFLLSSASAEVFANMALCPFEAVKVRVQAQPCFAKGLFDGFPKLYASEGTQGFYRGLIPLWGRNLPFSVVMFSTFEHSVDFLYRKVVKKRKEDCSITQQLGVTCLAGYAAGSIGSLISNPADNIVASLYNRKADSLMLAIRNIGLTNLFTRSLPIRVMLVGPSITLQWFFYDTIKVLGGLPTSGEVATVWGGMEAG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1204 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 94 IPR018108 -
Dere09g1204 302 SUPERFAMILY Mitochondrial carrier 13 279 IPR023395 -
Dere09g1204 302 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 13 284 - -
Dere09g1204 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 204 283 IPR018108 -
Dere09g1204 302 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 187 IPR018108 -
Dere09g1204 302 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 7 293 IPR044677 GO:0005315|GO:1990547
Dere09g1204 302 Pfam Mitochondrial carrier protein 109 190 IPR018108 -
Dere09g1204 302 Pfam Mitochondrial carrier protein 16 96 IPR018108 -
Dere09g1204 302 Gene3D Mitochondrial carrier domain 16 284 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1204 Dere-ChrDere09 15938586 15942595 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1204 8 292 Chloroplast and Mitochondria Gene Families AT2G17270 69.474 9.15e-157 438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1204 09 15938586 15942595 Dere09g1204 09 15938586 15942595 ECH