LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere09g1204	ATGGATTCCGCCGTCGAGGGTACGCCTAGGTATTATGGGCTCTGCGCCATTGGAGGAATGCTCAGTGCCGGCACTACCCATCTCGCCACTACTCCTTTTGACGTCTTAAAAGTCAATATGCAGGTGCACCCAATTAAGTATAACAGCATTTCTTCGTCCTTTACTACCATACTAAGAGAACAAGGGCCTTCTGCTCTCTGGAGAGGTTGGGCCGGCAAGTTCTTTGGATATGGTGCTCAAGGAGGCTGCAGATTTGGTCTTTACGAATATTTCAAGGGACTCTATTCCAACGTAATGGGAGACTGTAATAGGAGTTTGGTTTTCCTTCTTAGTAGCGCATCTGCTGAAGTATTTGCTAATATGGCTCTATGCCCATTTGAAGCTGTTAAAGTTAGAGTGCAAGCACAGCCCTGTTTTGCTAAGGGGTTGTTTGATGGCTTTCCAAAGTTATATGCATCGGAAGGCACCCAAGGATTCTACCGTGGGCTTATTCCACTTTGGGGCCGAAACCTTCCGTTTTCCGTGGTTATGTTCTCAACATTTGAGCATTCTGTTGATTTTTTGTATCGTAAAGTTGTTAAAAAAAGAAAAGAGGATTGCTCAATAACTCAACAACTTGGCGTGACATGCTTAGCTGGATATGCAGCTGGATCCATTGGCAGCTTGATTTCTAACCCTGCTGACAATATTGTAGCTTCTCTTTATAACAGAAAGGCTGATAGTCTCATGCTGGCTATCAGGAACATTGGTCTAACCAATCTATTTACCAGGAGCCTCCCCATTAGAGTTATGCTGGTTGGCCCTTCTATAACTTTGCAATGGTTCTTTTATGACACAATTAAAGTTTTAGGTGGATTGCCAACTAGTGGTGAAGTTGCGACTGTCTGGGGAGGAATGGAGGCGGGCTAG	909	0.4455	MDSAVEGTPRYYGLCAIGGMLSAGTTHLATTPFDVLKVNMQVHPIKYNSISSSFTTILREQGPSALWRGWAGKFFGYGAQGGCRFGLYEYFKGLYSNVMGDCNRSLVFLLSSASAEVFANMALCPFEAVKVRVQAQPCFAKGLFDGFPKLYASEGTQGFYRGLIPLWGRNLPFSVVMFSTFEHSVDFLYRKVVKKRKEDCSITQQLGVTCLAGYAAGSIGSLISNPADNIVASLYNRKADSLMLAIRNIGLTNLFTRSLPIRVMLVGPSITLQWFFYDTIKVLGGLPTSGEVATVWGGMEAG	302

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere09g1204	302	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	10	94	IPR018108	-
	Dere09g1204	302	SUPERFAMILY	Mitochondrial carrier	13	279	IPR023395	-
	Dere09g1204	302	FunFam	Mitochondrial phosphate carrier protein 1, mitochondrial	13	284	-	-
	Dere09g1204	302	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	204	283	IPR018108	-
	Dere09g1204	302	ProSiteProfiles	Solute carrier (Solcar) repeat profile.	103	187	IPR018108	-
	Dere09g1204	302	PANTHER	SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED	7	293	IPR044677	GO:0005315\|GO:1990547
	Dere09g1204	302	Pfam	Mitochondrial carrier protein	109	190	IPR018108	-
	Dere09g1204	302	Pfam	Mitochondrial carrier protein	16	96	IPR018108	-
	Dere09g1204	302	Gene3D	Mitochondrial carrier domain	16	284	IPR023395	-

Showing 1 to 9 of 9 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere09g1204	Dere-ChrDere09	15938586	15942595	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere09g1204	8	292	Chloroplast and Mitochondria Gene Families	AT2G17270	69.474	9.15e-157	438

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere09g1204	09	15938586	15942595	Dere09g1204	09	15938586	15942595	ECH

Showing 1 to 1 of 1 entries