Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1196 ATGAAGTTTCGATTTTTTTGCATTTCATGCCTTATAGTCATATTGCTCATCATCTTGTTTTCGAGCTTAACCGGTGATGTATCGGTATCAAAGTCAGAGAGCTCCCAAGTCTCTCTTGTCGGTGATCATGAGGAAGACTTCAAGGGCTTAGCTCTACCTTCAAGCCGATCTCTTCTGTCTCATCCATCTAAGCCTAGAACAGCACTAATTGCTGCCCCAGATCAAAATGGGACTATACATTTGGTGGAGAGTGGTTCCATGAGGATAGTATGGTCATTTCCAACAGGATCGCCAATTTACGGTTCATATCATGCTCCTCTCAAACAGGATAATGATAAAGAAAATATATCTGGACCAATAAGCGAGTTCATAGAAGTTGGAGATGACTGGGGGTTATATCAAAGAAAGCCCTTTGGTAAAATGAGGCTCTTAACATCTATTGAAGATGTTGTTAGAGCTACACCTAAAATATCAAATGATGGAGTTGTTATGCTTGGAGCTAAAAGAATCACCGTTTTTGAAGTTGATGCTAAAACTGGAAGGATCTTTAGAAGTTATGCTGCATCTGATTTTGATAATGCCTTTGCACTGTGGACTGATGACAGGCAAAGTGTTCAAAATACTCTCACTACTAAAAATAAGGAGCTGGTAAAGACTGATCCTCTTATGCTAAATATGCCAGAGCCGCTACTCTTGTTATTCAGGACAGATTATTCTCTACAAGCTATTGGTCCTGGATCAGAAAAAGTTGCATGGAGTATGACAGTAGCTGAATTTGAGGCTGTATTATATTGCCAATGTAATGAAAATCCATCTGGTAGGGCTTCATTTGATTCAGGGAGTAAGTATGCTTGTGACAGTGGCCTGGATTTTGCTTTGCCATACCCATGTCAGGAGAAAAAAAAGGTCTACCGCCTGCCAAAAAATTTTCCGTTACAACCTTCAATTGTTGAGAGATTACCTGAGTCTGATCATGGAAATGAAATGCTCCCAATTCCTGATTCATATCTGATGCTCCCCTCACAACCTAATAGTGATAGATTTTTGGATGGCCATGATAATATTAAGATGCTTCCCATGCCTGTGCCAAATTCTTTGCCTCCTCTGCAGCCAGAAATGGGCTTCCATGTCAACAGTGATGACCCTGTTGAGCTTCCTCAACCTCCTACAGAGATTATACCAGGTGAAGTTGATCTGAATAGGGTGATAACATGGTCAACAACATTGCCTTTGATTCTGTTCATAGTCTTTCTCCTGGTCTCTTTGATTTACTTCTATCCTCTGGTAGCTAAAAAGGATCTTGAATTGAAAGGCCAAAACAGTGAGTTTGATTTAAGAAGTACTCCTAAGAAAAAGAAAATGCGTAAGTCAGGAAAGAACAATGGCACTGTAGACAAAAGGGATAAGCAGCTGTCATCAGAAGATGAGGATGTAATGGCACGTAGCAGCATTGATAGGGAATCTTGGCTACATACTAATAAAGTAGATGAATGTGCTGTTGGACGCAAGATTGGTAAACTATTTGTATTGAATAAAGAAATTGCGAAGGGAAGCAACGGTACCATTGTCTTAGAGGGAACATATGAATGCCGAGCAGTTGCTGTAAAACGTCTTGTCCAGGCTCATCATGATGAGGCTTTTAAAGAAATTCAAAATCTCATTGCATCTGACCATCACCCAAACATTGTCCGATGGTATGGGGTGGAATATGATCAAGATTTTGTTTACCTTGCTCTGGAGCGTTGTACATGTAACTTGGATGATTTGATTCAGATTCACTCAGATATATCAGAAAACCTAGTGTATAGCAAGAACCAAGCTTTGATAAAGGCCCAGTTGGAGACAGGAAAGCATAATATGCAAAATCTTTGGAAAGCAAATGGCTTCCCATCACCTCTACTGTTGAAGCTGATGAGGGATGTAGTTTCAGGGCTTTGTCATTTGCATGAACTGGGAATAGTTCACCGGGATTTGAAACCACAAAATATTTTGATAAACAAGGAAAGATCTTTATGTGCGAAGCTTTCTGATATGGGCATTAGTAAACGCCTTCTTGACGATATGTCTTCTTTTGGCCATAATGGTACCGGCTGTGGCAGTTCAGGTTGGCAAGCACCAGAACAGCTTGCTCAAGGACGCCAAACAAGAGCAGTAGATTTATTTAGTTTAGGCTGTGTCCTTTTCTTCTGTCTTACAGGGGGAAGACATCCATTCGGAGAACGTCTTGAACGTGATGTCAATATAGTGAAAAATCGTAAGGACCTATTTTTAGTGGATTTCATTCCTGAAGCTGAGGATGTTATCTCTGGTTTATTAAATCCTGATCCTGATCTAAGGCCCAAGGCAGTTGAAGTACTGCACCATCCTTTTTTATGGGATTCAGAGATGAGACTTTCTTTTCTCCGCGATGCTAGTGACAGAGTGGAATTGGAAGATAGGGAGACTGATTCTGATCTTTTGAAGGCATTGGAAAGCAGTGCACCTGTGGCTTTGGGTGGGAAATGGGATGAAAAGTTGGAACCAGTCTTCATTGCTAACATTGGTCGTTACCGGCGATATAGATTTGACAGCATTCGAGACTTGTTACGAGTCATGAGAAACAAGCTGAATCACTACAGAGAATTGCCTCAAGAAATTCAGGAACTTGTAGGACCTGTTCCAGAAGGATTCAATGACTACTTTGCAAGTCGATTTCCGAAACTCTTGATTGAAGTGTACAAAGTTATATACAAATATTGCAAGACGGAGGAATGTTTTCAACGGTATTTTAAAAATGTTGACTAG 2784 0.4045 MKFRFFCISCLIVILLIILFSSLTGDVSVSKSESSQVSLVGDHEEDFKGLALPSSRSLLSHPSKPRTALIAAPDQNGTIHLVESGSMRIVWSFPTGSPIYGSYHAPLKQDNDKENISGPISEFIEVGDDWGLYQRKPFGKMRLLTSIEDVVRATPKISNDGVVMLGAKRITVFEVDAKTGRIFRSYAASDFDNAFALWTDDRQSVQNTLTTKNKELVKTDPLMLNMPEPLLLLFRTDYSLQAIGPGSEKVAWSMTVAEFEAVLYCQCNENPSGRASFDSGSKYACDSGLDFALPYPCQEKKKVYRLPKNFPLQPSIVERLPESDHGNEMLPIPDSYLMLPSQPNSDRFLDGHDNIKMLPMPVPNSLPPLQPEMGFHVNSDDPVELPQPPTEIIPGEVDLNRVITWSTTLPLILFIVFLLVSLIYFYPLVAKKDLELKGQNSEFDLRSTPKKKKMRKSGKNNGTVDKRDKQLSSEDEDVMARSSIDRESWLHTNKVDECAVGRKIGKLFVLNKEIAKGSNGTIVLEGTYECRAVAVKRLVQAHHDEAFKEIQNLIASDHHPNIVRWYGVEYDQDFVYLALERCTCNLDDLIQIHSDISENLVYSKNQALIKAQLETGKHNMQNLWKANGFPSPLLLKLMRDVVSGLCHLHELGIVHRDLKPQNILINKERSLCAKLSDMGISKRLLDDMSSFGHNGTGCGSSGWQAPEQLAQGRQTRAVDLFSLGCVLFFCLTGGRHPFGERLERDVNIVKNRKDLFLVDFIPEAEDVISGLLNPDPDLRPKAVEVLHHPFLWDSEMRLSFLRDASDRVELEDRETDSDLLKALESSAPVALGGKWDEKLEPVFIANIGRYRRYRFDSIRDLLRVMRNKLNHYRELPQEIQELVGPVPEGFNDYFASRFPKLLIEVYKVIYKYCKTEECFQRYFKNVD 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1196 927 ProSiteProfiles Protein kinase domain profile. 508 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1196 927 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1 795 927 - -
Dere09g1196 927 SMART PGNneu 856 910 - -
Dere09g1196 927 Gene3D KEN domain 794 927 IPR038357 -
Dere09g1196 927 Gene3D Transferase(Phosphotransferase) domain 1 613 793 - -
Dere09g1196 927 Gene3D Phosphorylase Kinase; domain 1 493 580 - -
Dere09g1196 927 PANTHER IRE1-RELATED 142 925 IPR045133 GO:0004521|GO:0004674|GO:0030968
Dere09g1196 927 FunFam Serine/threonine-protein kinase/endoribonuclease IRE1a 616 793 - -
Dere09g1196 927 CDD RNase_Ire1 795 923 - -
Dere09g1196 927 FunFam Putative Serine/threonine-protein kinase/endoribonuclease IRE1 501 580 - -
Dere09g1196 927 Pfam Protein kinase domain 510 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere09g1196 927 MobiDBLite consensus disorder prediction 445 479 - -
Dere09g1196 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Dere09g1196 927 MobiDBLite consensus disorder prediction 458 479 - -
Dere09g1196 927 Pfam Ribonuclease 2-5A 797 923 IPR010513 GO:0004540|GO:0006397
Dere09g1196 927 ProSiteProfiles KEN domain profile. 794 925 IPR010513 GO:0004540|GO:0006397
Dere09g1196 927 SUPERFAMILY Protein kinase-like (PK-like) 502 799 IPR011009 -
Dere09g1196 927 SMART serkin_6 508 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1196 Dere-ChrDere09 15731021 15736594 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1196 534 791 MAP Kinase Kinase Kinase AT3G06030 27.481 1.54e-21 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Dere09g1196 Pkinase 4e-40 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1196 09 15731021 15736594 Dere09g1196 09 15731021 15736594 ECH