Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1195 ATGTGGCCAACCACTGCACTCTCGGCATCATTTTCTTTTTCCCATATTCATTTTCATTTTGTGGTTTCCTGGCAATGGAATTTCGGTTCTCATGTTCCCCAGAATGTTTGCAGTCATGTTCTGCTTCTCCTCTCGGTTCTCTCTTCCAATGGAACTGACGGGTACTTTTGGCACCTTACAATTGCCCTTGTTTCTCGTGTACTTGATTGGCTTAAGGCAACCATGATAAGAGTCTGGCTTGCGGTGTTAATGGTTCTCTGCAATGGGTTCTCTTCAACTGGGGCTGGCTCGAATCATTCTACAATACCTGATTCTGTAAATATTGGGGTTCTCTACTCTTTCAACACCACCGTTGGTAGAATTGTAAGAATTGCCGTAGAAGCTGCAGTCGAAGATGTAAATTCTGATCCATCTATTCTTGGAAAAACTAAGCTCAAAGTCTCAATGCAAGAGGATTCCAAATACAGAGGTTTTCTGAGCATTGCTGAAGCCTTGCAACTCGCTGCGAAACACACTTTGGCTATAATTGGCCCTCAATCCTCTGTCACTGCTCATGTCATATCTCACATTGCAAACGAGCTCCAAGTTCCTCTACTATCAGTATCTGCAACGGACCCGACACTCTCTTCCCTTCAATTCCCATTCTTTATTAGAACTTCTCATAATGATCTTTATCAGATGACTGCAATAGCAGAGCTTGTTGACTACTATGGGTGGAGAGAGGTGATTGCAGTCTATGTTGATGATGACCATGGGAGAAATGGGATTAGTGCATTAGGGGATAAGCTCGCCGAGAGACGTTGTAAGATCTCCTATAAAGCCCCTTTGAGCCCTGAAGCAACAAGGGAGGAGATTACTGACGTGCTTGTTCAGGTGGCTTTGGCAGAATCTAGGATTATAGTTCTACACACTAATACTGCTTGGGGCCCAAAGGTGTTTAGTGTGGCAAAGTATCTTGAAATGATGGGACCTGGGTATGTTTGGATAGCCACTAATTTTCTCTCTACTCTTCTGGATACAAATGGTCCACTCCCTCAAGATACCATGGAAATGATTCAAGGGATCCTTACACTACGTATCTACACACCAGATTCAGAGCTCAAAAGAAGATTTGCTTCAAGGTGGAAAAACTTGACTAGTGGGAAGACTGCTAGTAGTAATTCTCACCTTGGATTGAGTACTTTTGGTCTCTATGCATATGATACTGTTTTTCTGCTTGCTCGTGCACTTGATAGTTTCTTAAAACAAGGGAACCCAATTACATTCTCATACGATTCAAAGTTATCTGAACTACGGGGGAACAATTTGAATCTTGATTCTCTGAACATTTTTGATCAAGGAAAGTTGTTGAGAAAAAGTATCTACGAGGTTAACATGACTGGTGTGACAGGTACTATTAAGTATACATCTGATGGAAACCTTGTTAATCCAACGTTTGAAATCATCAATGTGATTGGAACAGGATATAGGAGGATTGGTTATTGGAATAATCGCACTGGATTATCAGTTGATCCTCCTGAAGAACACTATTCAAAACCACCCAATCGGTCTAATGCGAATCAAAAGTTACATCCAGTGATTTGGCCGGGGGATACACCCCAGAAGCCTCGTGGCTGGGTTTTTCCAAACAATGGGAGGCTTTTAAGAATTGGAGTGCCAAGAAGAGCTAGTTACCGTCAATTTGTCTCACAAGTACAAGGCACTGACATGTTCAAGGGCTTCTGCATTGATGTGTTTATTTCTGCAGTGAACTTGCTGCCATATGGTGTTCCTTATAAGTTTATTCCATACGGGGATGGTCGTAACAATCCTAGTAACACCGAGCTTGTTCGATTGATAACGGCAGGTGTTTTCGATGGAGCTGTAGGTGACATTACAATCACTACTGACAGAACAAAGATGGTGGATTTTACTCAGCCATTTATTGGATCTGGTCTAGTAGTTGTAGCACCAGTTTGGAAGTTGGAATCTGGTGCTTGGGCCTTTTTGAGGCCATTTAGTGCAAAGATGTGGGGTGTCACAGCTGTCTTTTTCCTAGCAGTTGGAGCAGTTGTTTGGATTCTGGAGCATAGGTTGAATGATGAGTTTCGGGGACCTCCCAGAAAACAAGTAGTTACAGTTTTGTGGTTCAGTTTTTCAACGATGTTTTTTGCCCACAGGGAAAATACAGTGAGCACTCTTGGTCGCTTTGTGCTACTGATATGGTTATTTGTAGTTCTTATAATTAACTCAAGTTACACGGCAAGCCTAACCTCAATCCTCACAGTGCAGCAGCTTTCTTCACCCGTTAAAGGGATTGAAACTTTAGTTACTAGCAAAGAGCCTATCGGCTACATGCAGGGTTCTTTCACTAGAAACTATCTAATTGAAGAAGTTGGTATTGATGAATCCAGACTTGTTCCTCTAAGGACACCAGAAGACTCTGCTAAAGCATTGAAAGATGGTCCCAAAAAGGGTGGTATTGCTGCTTATGTTGATGAGCGTGCTTACATTGAGCTCTTCCTTTCAAGCCGATGTGAGTTTACTATAGTAGGTCAAGAGTTTACCAGAAACGATTGGGGATTTGCTTTTCCACGAGACTCACCTTTGGCTATTGACTTGTCTACTGCCATATTGGAATTAGCAGAGAATGGAGACTTACAAAGGATCCATGACAAATGGCTTCTGAATATTGCTTGCCTAACACAAAATGCGAAATTTGAAGTGGACAGACTTCATCTGAGTAGCTTCTGGGGGCTCTATATGATCTGTGGGTTCGCTTGTTTGCTTGCTTTATTGATATATCTTATACTGATGATGAGGCAGTACAAAAAGCACTACGTAGAGGAGGCTGAGTCTGCTAATGGCCAAAGGTCACGATCCTCTTCAAGTATTCGGACTTTCATTTCATTTGCAGACCAGAAAGAATCTGAAGTAAAGAACCGATCCAAAAGAAGGCAAATGGAGGGGCCCTCTAAGAGAAGCACAAATGCAAGTGGATCAGTCATTACCTTTAACCAAAGATATGGTCGATCATATTCAAGCAAGAGCATTGATTCTGCCTGTGAAGCCTGA 3054 0.4224 MWPTTALSASFSFSHIHFHFVVSWQWNFGSHVPQNVCSHVLLLLSVLSSNGTDGYFWHLTIALVSRVLDWLKATMIRVWLAVLMVLCNGFSSTGAGSNHSTIPDSVNIGVLYSFNTTVGRIVRIAVEAAVEDVNSDPSILGKTKLKVSMQEDSKYRGFLSIAEALQLAAKHTLAIIGPQSSVTAHVISHIANELQVPLLSVSATDPTLSSLQFPFFIRTSHNDLYQMTAIAELVDYYGWREVIAVYVDDDHGRNGISALGDKLAERRCKISYKAPLSPEATREEITDVLVQVALAESRIIVLHTNTAWGPKVFSVAKYLEMMGPGYVWIATNFLSTLLDTNGPLPQDTMEMIQGILTLRIYTPDSELKRRFASRWKNLTSGKTASSNSHLGLSTFGLYAYDTVFLLARALDSFLKQGNPITFSYDSKLSELRGNNLNLDSLNIFDQGKLLRKSIYEVNMTGVTGTIKYTSDGNLVNPTFEIINVIGTGYRRIGYWNNRTGLSVDPPEEHYSKPPNRSNANQKLHPVIWPGDTPQKPRGWVFPNNGRLLRIGVPRRASYRQFVSQVQGTDMFKGFCIDVFISAVNLLPYGVPYKFIPYGDGRNNPSNTELVRLITAGVFDGAVGDITITTDRTKMVDFTQPFIGSGLVVVAPVWKLESGAWAFLRPFSAKMWGVTAVFFLAVGAVVWILEHRLNDEFRGPPRKQVVTVLWFSFSTMFFAHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPVKGIETLVTSKEPIGYMQGSFTRNYLIEEVGIDESRLVPLRTPEDSAKALKDGPKKGGIAAYVDERAYIELFLSSRCEFTIVGQEFTRNDWGFAFPRDSPLAIDLSTAILELAENGDLQRIHDKWLLNIACLTQNAKFEVDRLHLSSFWGLYMICGFACLLALLIYLILMMRQYKKHYVEEAESANGQRSRSSSSIRTFISFADQKESEVKNRSKRRQMEGPSKRSTNASGSVITFNQRYGRSYSSKSIDSACEA 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1195 1017 FunFam Glutamate receptor 659 789 - -
Dere09g1195 1017 SUPERFAMILY Periplasmic binding protein-like II 526 889 - -
Dere09g1195 1017 FunFam Glutamate receptor 222 378 - -
Dere09g1195 1017 SUPERFAMILY Periplasmic binding protein-like I 102 540 IPR028082 -
Dere09g1195 1017 Gene3D - 659 786 - -
Dere09g1195 1017 Gene3D - 834 895 - -
Dere09g1195 1017 SMART GluR_14 549 890 IPR001320 GO:0015276|GO:0016020
Dere09g1195 1017 Gene3D - 222 501 - -
Dere09g1195 1017 Pfam Bacterial extracellular solute-binding proteins, family 3 571 888 IPR001638 -
Dere09g1195 1017 CDD PBP1_GABAb_receptor_plant 107 505 IPR044440 -
Dere09g1195 1017 CDD GluR_Plant 548 888 - -
Dere09g1195 1017 MobiDBLite consensus disorder prediction 968 996 - -
Dere09g1195 1017 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 106 959 IPR015683 -
Dere09g1195 1017 MobiDBLite consensus disorder prediction 968 984 - -
Dere09g1195 1017 FunFam Glutamate receptor 543 659 - -
Dere09g1195 1017 Pfam Ligand-gated ion channel 889 921 IPR001320 GO:0015276|GO:0016020
Dere09g1195 1017 Pfam Receptor family ligand binding region 124 486 IPR001828 -
Dere09g1195 1017 Gene3D - 543 658 - -
Dere09g1195 1017 PIRSF IGluLR_plant 72 1013 IPR017103 -
Dere09g1195 1017 Gene3D - 124 476 - -
Dere09g1195 1017 FunFam Glutamate receptor 785 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1195 Dere-ChrDere09 15723659 15728653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1195 79 982 Ion Channels AT3G51480 60.663 0.0 1162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1195 09 15723659 15728653 Dere13g0822 13 10191747 10195829 CCT
Dere09g1195 09 15723659 15728653 Dere09g1195 09 15723659 15728653 ECH
Dere13g0822 13 10191747 10195829 Dere09g1195 09 15723659 15728653 ECH