Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1193 ATGTGTTTGGTTCTCTGGAAAGTCCAAGCTAAGAAACGCTTCACTTTTCTTGGTCGCCAAAAAACCGCTTCTTCTGATCTGTATATTTTGCCGTTTCGAGGAATGGCTCAGGGGAGTGATTGTTCGCCTCCGACAACTACATTAACTGGTGGGTGCCTCAAGGGCAATAGCGTGTCTGCCATGGAAGACCGAAACGGTGATACAGTGGGAAATTTGAATCAGTGTAGTGGGAAACCTCCGAGAGACCATTCGGCTTTGCGCTATTGCAGCAGCTCTACGTATTTAGCTGAATCGGAATTAGATTTTGGGATTACTGGGTCCAAATCACCCCCGGAAGAAAAATCAGAGTTTTCTCCTATATTTCGATCTGGAAGCTGTTCTGAGAAAGGTCCAAAGCAGTACATGGAGGATGAGTACATGTGTGTTGACAATCTCCATGAATATGTTAGTCCAAGAGCTAAAATCCCTTCTCCTGGGGCATTTTACGGGGTATTTGATGGACATGGTGGTGTTGATGCAGCATCATTTATAAGAAAGAACATCCTAAAGTTTATCATGGAAGATTCCCATTTCCCAACTGGTATAAAAAAGGCTGTAAAGAGTGCCTTTTCAAAGGCTGATCATGCATTTGCTGATGCTAGTGCCCTCGATAATTCATCTGGCACCACTGTTCTGACTGCCCTCATGCTGGGAAGGATCATGCTAATTGCCAATGCGGGAGATTCTCGTGCTGTACTGGGCAAACGGGGAAGAGCCATTGAACTTTCTAAAGACCATAAACCAAACTGCACTTCAGAAAGACTAAGAATCGAGAAACTGGGCGGTGTCATCTATGATGGATACCTCAATGGACAACTATCAGTGGCACGTGCTCTTGGAGACTGGCATATCAAGGGTTCTAAAGGTTCTAAAAGTCCCTTAAGCTCTGAGCCTGAGCTGGAGGAGATTATCCTGACAGAAGAAGATGAGTTCTTGATAATGGGTTGTGATGGCATATGGGATGTAATGAGCAGCCAGTGTGCTGTGACAATGGTGAGGAAGGAGCTCATGCAGCATAATGATCCAGCAAAGTGTGCAAAGGCGCTCGTGACTGAGGCACTCCAACGCAACTCATGCGATAATCTGACAGTTGTGGTGGTGTGTTTCTCCAAAGATCCTCCTCCTAAAATTGAAATACCCAGAAATCATAAGAGGAGGAGTATATCAGCCGAAGGGCTGGATCTTCTCAAGGGTGTCTTAAGCTGTTAG 1248 0.4535 MCLVLWKVQAKKRFTFLGRQKTASSDLYILPFRGMAQGSDCSPPTTTLTGGCLKGNSVSAMEDRNGDTVGNLNQCSGKPPRDHSALRYCSSSTYLAESELDFGITGSKSPPEEKSEFSPIFRSGSCSEKGPKQYMEDEYMCVDNLHEYVSPRAKIPSPGAFYGVFDGHGGVDAASFIRKNILKFIMEDSHFPTGIKKAVKSAFSKADHAFADASALDNSSGTTVLTALMLGRIMLIANAGDSRAVLGKRGRAIELSKDHKPNCTSERLRIEKLGGVIYDGYLNGQLSVARALGDWHIKGSKGSKSPLSSEPELEEIILTEEDEFLIMGCDGIWDVMSSQCAVTMVRKELMQHNDPAKCAKALVTEALQRNSCDNLTVVVVCFSKDPPPKIEIPRNHKRRSISAEGLDLLKGVLSC 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1193 415 SUPERFAMILY PP2C-like 115 383 IPR036457 -
Dere09g1193 415 FunFam Probable protein phosphatase 2C 22 107 385 - -
Dere09g1193 415 Pfam Protein phosphatase 2C 123 374 IPR001932 -
Dere09g1193 415 ProSiteProfiles PPM-type phosphatase domain profile. 122 382 IPR001932 -
Dere09g1193 415 ProSitePatterns PPM-type phosphatase domain signature. 161 169 IPR000222 GO:0043169
Dere09g1193 415 Gene3D - 105 386 IPR036457 -
Dere09g1193 415 SMART PP2C_SIG_2 137 382 IPR001932 -
Dere09g1193 415 SMART PP2C_4 112 380 IPR001932 -
Dere09g1193 415 CDD PP2Cc 121 382 IPR001932 -
Dere09g1193 415 PANTHER PROTEIN PHOSPHATASE 2C 109 380 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1193 Dere-ChrDere09 15696150 15698588 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1193 106 414 PP2C-type Phosphatase Gene Family AT3G51470 79.288 0.0 513