Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere09g1154 ATGTCGCACTTTGGAAGATCTGGTCCTCTTGACATTAGAGACACCTATTCCCTTCTAGTCCTCAATATCACTTTCCGTACAAACGTTGATGATCTTTACCCCCTTTTTGACAAGTACGGCAAGGCATCGTCGTTCCATGTGGCAACTTTCTTTGACAGGATGAAAGAGAGTGTTTTCCATCATTATGTGTTAAAGGCACTGTCGGGGCCACCATTGGAGGAGGCGGAGATGGAGCTGACACGACAGCACTTGCAGGTGTCGAAGTCATTGACAGCTAGGTTGAGGTATGGGAAGTTTGGGCCGTTGTTGAGGTCGAAGAAAGGAGACTGA 330 0.4758 MSHFGRSGPLDIRDTYSLLVLNITFRTNVDDLYPLFDKYGKASSFHVATFFDRMKESVFHHYVLKALSGPPLEEAEMELTRQHLQVSKSLTARLRYGKFGPLLRSKKGD 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere09g1154 109 SUPERFAMILY RNA-binding domain, RBD 7 47 IPR035979 GO:0003676
Dere09g1154 109 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 42 78 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere09g1154 Dere-ChrDere09 15084663 15084992 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere09g1154 42 81 Mechanosensitive Ion Channel Family AT2G17000 57.500 1.24e-11 57.8